Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:104341704-104471728

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Serpina3k 12 104338486 to 104345739 7253 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3K
Tssr114855 12 104343064 to 104343072 8 + TSS region transcription start site region 114855
Tssr117575 12 104343100 to 104343113 13 - TSS region transcription start site region 117575
Tssr114856 12 104344120 to 104344127 7 + TSS region transcription start site region 114856
Tssr114857 12 104344132 to 104344144 12 + TSS region transcription start site region 114857
Tssr114858 12 104344204 to 104344228 24 + TSS region transcription start site region 114858
Tssr114859 12 104345269 to 104345275 6 + TSS region transcription start site region 114859
Tssr114860 12 104345289 to 104345311 22 + TSS region transcription start site region 114860
Tssr114861 12 104345313 to 104345328 15 + TSS region transcription start site region 114861
Tssr114862 12 104345344 to 104345354 10 + TSS region transcription start site region 114862
Tssr114863 12 104345361 to 104345372 11 + TSS region transcription start site region 114863
Tssr114864 12 104345411 to 104345417 6 + TSS region transcription start site region 114864
Tssr114865 12 104345462 to 104345471 9 + TSS region transcription start site region 114865
Tssr114866 12 104345475 to 104345502 27 + TSS region transcription start site region 114866
Tssr114867 12 104345531 to 104345540 9 + TSS region transcription start site region 114867
Tssr114868 12 104345548 to 104345559 11 + TSS region transcription start site region 114868
Serpina3l-ps 12 104358003 to 104363534 5531 + pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3L, pseudogene
Serpina3m 12 104387157 to 104394259 7102 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3M
Tssr114869 12 104387663 to 104387666 3 + TSS region transcription start site region 114869
Tssr114870 12 104387759 to 104387791 32 + TSS region transcription start site region 114870
Gm40561 12 104401802 to 104404168 2366 - lncRNA gene predicted gene, 40561
Tssr114871 12 104406704 to 104406728 24 + TSS region transcription start site region 114871
Serpina3n 12 104406729 to 104414329 7600 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3N
Tssr114872 12 104406733 to 104406754 21 + TSS region transcription start site region 114872
Tssr114873 12 104408885 to 104408912 27 + TSS region transcription start site region 114873
Tssr114874 12 104413470 to 104413483 13 + TSS region transcription start site region 114874
Tssr114875 12 104413603 to 104413616 13 + TSS region transcription start site region 114875
Tssr114876 12 104413639 to 104413657 18 + TSS region transcription start site region 114876
Tssr114877 12 104413674 to 104413702 28 + TSS region transcription start site region 114877
Tssr114878 12 104413768 to 104413779 11 + TSS region transcription start site region 114878
Tssr114879 12 104413822 to 104413862 40 + TSS region transcription start site region 114879
Tssr114880 12 104413872 to 104413879 7 + TSS region transcription start site region 114880
Tssr114881 12 104414057 to 104414076 19 + TSS region transcription start site region 114881
Tssr114882 12 104414080 to 104414101 21 + TSS region transcription start site region 114882
Gm24334 12 104419273 to 104419400 127 - snoRNA gene predicted gene, 24334
Gm40562 12 104433870 to 104440158 6288 + lncRNA gene predicted gene, 40562
Cpgi5024 12 104440138 to 104440421 283 CpG island CpG island 5024
Cpgi5025 12 104446794 to 104447420 626 CpG island CpG island 5025
Cpgi5026 12 104471200 to 104473734 2534 CpG island CpG island 5026
Gsc 12 104471209 to 104473236 2027 - protein coding gene goosecoid homeobox