Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:103777390-104207393

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17043 12 103786930 to 103804362 17432 - pseudogene predicted gene 17043
Gm8893 12 103817856 to 103822243 4387 - pseudogene predicted gene 8893
Tssr117527 12 103828031 to 103828062 31 - TSS region transcription start site region 117527
Gm6918 12 103841684 to 103842339 655 - pseudogene predicted gene 6918
Serpina1a 12 103853589 to 103863562 9973 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 1A
Tssr117528 12 103855866 to 103855904 38 - TSS region transcription start site region 117528
Tssr117529 12 103863262 to 103863299 37 - TSS region transcription start site region 117529
Tssr117530 12 103863595 to 103863630 35 - TSS region transcription start site region 117530
Tssr117531 12 103865672 to 103865685 13 - TSS region transcription start site region 117531
Tssr117532 12 103865726 to 103865740 14 - TSS region transcription start site region 117532
Tssr117533 12 103865758 to 103865772 14 - TSS region transcription start site region 117533
Tssr117534 12 103865774 to 103865783 9 - TSS region transcription start site region 117534
Gm8895 12 103880856 to 103881511 655 - pseudogene predicted gene 8895
Serpina1c 12 103894926 to 103904887 9961 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 1C
Tssr3929 12 103895081 to 103895087 6 + TSS region transcription start site region 3929
Tssr114819 12 103895087 to 103895128 41 + TSS region transcription start site region 114819
Tssr117535 12 103895125 to 103895167 42 - TSS region transcription start site region 117535
B430119L08Rik 12 103895897 to 103898784 2887 + antisense lncRNA gene RIKEN cDNA B430119L08 gene
Tssr117536 12 103897064 to 103897095 31 - TSS region transcription start site region 117536
Tssr117537 12 103897206 to 103897238 32 - TSS region transcription start site region 117537
Tssr3930 12 103899238 to 103899277 39 - TSS region transcription start site region 3930
Tssr117538 12 103904892 to 103904901 9 - TSS region transcription start site region 117538
Tssr117539 12 103904944 to 103904955 11 - TSS region transcription start site region 117539
Tssr117540 12 103907030 to 103907031 1 - TSS region transcription start site region 117540
Gm17198 12 103919548 to 103926291 6743 - pseudogene predicted gene 17198
Serpina1e 12 103946931 to 103956897 9966 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 1E
Tssr117541 12 103947112 to 103947141 29 - TSS region transcription start site region 117541
Tssr114820 12 103947126 to 103947132 6 + TSS region transcription start site region 114820
Tssr117542 12 103948159 to 103948169 10 - TSS region transcription start site region 117542
Tssr117543 12 103949150 to 103949172 22 - TSS region transcription start site region 117543
Tssr117544 12 103949280 to 103949317 37 - TSS region transcription start site region 117544
Tssr114821 12 103950790 to 103950837 47 + TSS region transcription start site region 114821
Tssr117545 12 103951082 to 103951084 2 - TSS region transcription start site region 117545
Tssr117546 12 103951256 to 103951267 11 - TSS region transcription start site region 117546
Tssr117547 12 103951293 to 103951307 14 - TSS region transcription start site region 117547
Tssr117548 12 103951386 to 103951412 26 - TSS region transcription start site region 117548
Tssr117549 12 103956569 to 103956592 23 - TSS region transcription start site region 117549
Tssr117550 12 103956891 to 103956901 10 - TSS region transcription start site region 117550
Tssr3931 12 103958862 to 103958869 7 - TSS region transcription start site region 3931
Tssr117551 12 103958878 to 103958889 11 - TSS region transcription start site region 117551
Tssr117552 12 103958894 to 103958919 25 - TSS region transcription start site region 117552
Tssr117553 12 103958924 to 103958935 11 - TSS region transcription start site region 117553
Tssr117554 12 103958939 to 103958945 6 - TSS region transcription start site region 117554
Serpina11 12 103980243 to 103989957 9714 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
Gm28577 12 103984792 to 103996579 11787 - unclassified non-coding RNA gene predicted gene 28577
Tssr117555 12 103989919 to 103989946 27 - TSS region transcription start site region 117555
Tssr117556 12 103989950 to 103989972 22 - TSS region transcription start site region 117556
Tssr3932 12 103992390 to 103992393 3 + TSS region transcription start site region 3932
Serpina9 12 103996613 to 104013776 17163 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
Tssr117557 12 104002726 to 104002734 8 - TSS region transcription start site region 117557
Tssr117558 12 104008736 to 104008753 17 - TSS region transcription start site region 117558
Tssr117559 12 104009000 to 104009035 35 - TSS region transcription start site region 117559
Tssr117560 12 104013640 to 104013658 18 - TSS region transcription start site region 117560
Tssr117561 12 104013753 to 104013776 23 - TSS region transcription start site region 117561
Tssr117562 12 104013779 to 104013788 9 - TSS region transcription start site region 117562
Gm37496 12 104021919 to 104024427 2508 - unclassified gene predicted gene, 37496
Serpina12 12 104028769 to 104044443 15674 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
Gm31271 12 104032440 to 104037723 5283 + lncRNA gene predicted gene, 31271
Tssr117563 12 104032870 to 104032893 23 - TSS region transcription start site region 117563
Tssr117564 12 104035810 to 104035820 10 - TSS region transcription start site region 117564
Tssr117565 12 104035831 to 104035852 21 - TSS region transcription start site region 117565
Tssr117566 12 104044288 to 104044299 11 - TSS region transcription start site region 117566
Tssr117567 12 104044350 to 104044366 16 - TSS region transcription start site region 117567
Tssr117568 12 104044375 to 104044390 15 - TSS region transcription start site region 117568
Tssr117569 12 104044431 to 104044447 16 - TSS region transcription start site region 117569
Tssr114822 12 104052726 to 104052755 29 + TSS region transcription start site region 114822
Tssr114823 12 104077936 to 104077952 16 + TSS region transcription start site region 114823
Serpina4-ps1 12 104080649 to 104086724 6075 + pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1
Tssr114824 12 104084174 to 104084185 11 + TSS region transcription start site region 114824
Tssr114825 12 104084220 to 104084231 11 + TSS region transcription start site region 114825
Tssr114826 12 104100982 to 104100998 16 + TSS region transcription start site region 114826
Tssr114827 12 104101020 to 104101028 8 + TSS region transcription start site region 114827
Tssr114828 12 104101087 to 104101098 11 + TSS region transcription start site region 114828
Serpina5 12 104101113 to 104106137 5024 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 5
Tssr114829 12 104101142 to 104101157 15 + TSS region transcription start site region 114829
Tssr114830 12 104101160 to 104101169 9 + TSS region transcription start site region 114830
Tssr114831 12 104101173 to 104101176 3 + TSS region transcription start site region 114831
Gm23289 12 104109283 to 104109390 107 + rRNA gene predicted gene, 23289
Serpina3a 12 104112724 to 104121896 9172 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3A
Tssr114832 12 104127995 to 104128002 7 + TSS region transcription start site region 114832
Serpina3b 12 104127996 to 104139545 11549 + protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3B
Serpina3c 12 104146907 to 104153931 7024 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 3C
Tssr117570 12 104153058 to 104153066 8 - TSS region transcription start site region 117570
Tssr117571 12 104153815 to 104153833 18 - TSS region transcription start site region 117571
Tssr117572 12 104153846 to 104153891 45 - TSS region transcription start site region 117572
Serpina3d-ps 12 104175571 to 104178310 2739 - pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3D, pseudogene
Serpina3e-ps 12 104189517 to 104192926 3409 - pseudogene serine (or cysteine) peptidase inhibitor, clade A, member 3E, pseudogene
Tssr117573 12 104194859 to 104194865 6 - TSS region transcription start site region 117573