Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:102558583-102714869

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chga 12 102554969 to 102565028 10059 + protein coding gene chromogranin A
Tssr114766 12 102561827 to 102561840 13 + TSS region transcription start site region 114766
Tssr117428 12 102561951 to 102561986 35 - TSS region transcription start site region 117428
Tssr114767 12 102562593 to 102562628 35 + TSS region transcription start site region 114767
Itpk1 12 102568583 to 102704869 136286 - protein coding gene inositol 1,3,4-triphosphate 5/6 kinase
Cpgi5010 12 102570215 to 102570395 180 CpG island CpG island 5010
Gm37019 12 102589277 to 102591410 2133 - unclassified gene predicted gene, 37019
Tssr117429 12 102591314 to 102591317 3 - TSS region transcription start site region 117429
Tssr114768 12 102612678 to 102612688 10 + TSS region transcription start site region 114768
Gm20069 12 102612680 to 102618516 5836 + antisense lncRNA gene predicted gene, 20069
Tssr117430 12 102623378 to 102623404 26 - TSS region transcription start site region 117430
Tssr117431 12 102631886 to 102631914 28 - TSS region transcription start site region 117431
Tssr114769 12 102647023 to 102647050 27 + TSS region transcription start site region 114769
Tssr117432 12 102647750 to 102647751 1 - TSS region transcription start site region 117432
Tssr117433 12 102652640 to 102652652 12 - TSS region transcription start site region 117433
Tssr117434 12 102653302 to 102653315 13 - TSS region transcription start site region 117434
Tssr117435 12 102653326 to 102653337 11 - TSS region transcription start site region 117435
Tssr117436 12 102657862 to 102657871 9 - TSS region transcription start site region 117436
Tssr117437 12 102657892 to 102657906 14 - TSS region transcription start site region 117437
Gm28373 12 102673017 to 102727333 54316 - unclassified non-coding RNA gene predicted gene 28373
Tssr117438 12 102673592 to 102673601 9 - TSS region transcription start site region 117438
Mir1936 12 102684928 to 102685020 92 - miRNA gene microRNA 1936
Tssr117439 12 102695549 to 102695582 33 - TSS region transcription start site region 117439
Gm40559 12 102695895 to 102702318 6423 + lncRNA gene predicted gene, 40559
Cpgi5011 12 102704049 to 102705830 1781 CpG island CpG island 5011
Tssr117440 12 102704896 to 102704980 84 - TSS region transcription start site region 117440
Gm30296 12 102710206 to 102733930 23724 + lncRNA gene predicted gene, 30296