Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:101186274-102106279

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18848 12 101205723 to 101206514 791 + pseudogene predicted gene, 18848
Gm18795 12 101218176 to 101283710 65534 + pseudogene predicted gene, 18795
Mylf-ps 12 101221997 to 101222417 420 - pseudogene myosin light chain, alkali, fast skeletal muscle, pseudogene
Tssr117356 12 101222025 to 101222060 35 - TSS region transcription start site region 117356
Tssr114728 12 101222062 to 101222082 20 + TSS region transcription start site region 114728
Tssr117357 12 101222114 to 101222129 15 - TSS region transcription start site region 117357
Gm22749 12 101223592 to 101223698 106 - snRNA gene predicted gene, 22749
D12Dcr12 12 101311365 to 101311460 95 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 12
Tssr3922 12 101382876 to 101382891 15 + TSS region transcription start site region 3922
Catsperb 12 101404653 to 101626009 221356 + protein coding gene cation channel sperm associated auxiliary subunit beta
Gm24542 12 101554079 to 101554188 109 + miRNA gene predicted gene, 24542
Tc2n 12 101645443 to 101718523 73080 - protein coding gene tandem C2 domains, nuclear
Gm16285 12 101646186 to 101646532 346 + pseudogene predicted gene 16285
Tssr117358 12 101646274 to 101646279 5 - TSS region transcription start site region 117358
Cpgi4997 12 101717934 to 101718973 1039 CpG island CpG island 4997
Tssr117359 12 101718407 to 101718423 16 - TSS region transcription start site region 117359
Tssr117360 12 101718513 to 101718530 17 - TSS region transcription start site region 117360
Fbln5 12 101746565 to 101819055 72490 - protein coding gene fibulin 5
Tssr117361 12 101809853 to 101809865 12 - TSS region transcription start site region 117361
Tssr117362 12 101809894 to 101809907 13 - TSS region transcription start site region 117362
Tssr117363 12 101818477 to 101818488 11 - TSS region transcription start site region 117363
Tssr117364 12 101818515 to 101818540 25 - TSS region transcription start site region 117364
Cpgi4998 12 101818703 to 101819413 710 CpG island CpG island 4998
Tssr117365 12 101818801 to 101818812 11 - TSS region transcription start site region 117365
Tssr117366 12 101818855 to 101818866 11 - TSS region transcription start site region 117366
Tssr117367 12 101818874 to 101818896 22 - TSS region transcription start site region 117367
Tssr117368 12 101818905 to 101818920 15 - TSS region transcription start site region 117368
Tssr117369 12 101818943 to 101818952 9 - TSS region transcription start site region 117369
Tssr117370 12 101818954 to 101818963 9 - TSS region transcription start site region 117370
Tssr117371 12 101818996 to 101819007 11 - TSS region transcription start site region 117371
Tssr117372 12 101819023 to 101819034 11 - TSS region transcription start site region 117372
Tssr117373 12 101819048 to 101819061 13 - TSS region transcription start site region 117373
Tssr117374 12 101819064 to 101819078 14 - TSS region transcription start site region 117374
Tssr117375 12 101819081 to 101819106 25 - TSS region transcription start site region 117375
Tssr117376 12 101819108 to 101819113 5 - TSS region transcription start site region 117376
Trip11 12 101834043 to 101913171 79128 - protein coding gene thyroid hormone receptor interactor 11
Tssr117377 12 101837520 to 101837537 17 - TSS region transcription start site region 117377
Gm20701 12 101866949 to 101867295 346 + pseudogene predicted gene 20701
Tssr117378 12 101880538 to 101880550 12 - TSS region transcription start site region 117378
Tssr117379 12 101886940 to 101886955 15 - TSS region transcription start site region 117379
Gm20702 12 101906080 to 101906539 459 + pseudogene predicted gene 20702
Cpgi4999 12 101912414 to 101913495 1081 CpG island CpG island 4999
Tssr117380 12 101913116 to 101913161 45 - TSS region transcription start site region 117380
Gm20036 12 101913240 to 101915335 2095 + unclassified non-coding RNA gene predicted gene, 20036
Atxn3 12 101918901 to 101958243 39342 - protein coding gene ataxin 3
Cpgi5000 12 101957762 to 101958468 706 CpG island CpG island 5000
Tssr117381 12 101958161 to 101958212 51 - TSS region transcription start site region 117381
Ndufb1-ps 12 101968099 to 101977063 8964 - bidirectional promoter lncRNA gene NADH:ubiquinone oxidoreductase subunit B1
Tssr117382 12 101971850 to 101971863 13 - TSS region transcription start site region 117382
Cpgi5001 12 101975339 to 101976523 1184 CpG island CpG island 5001
Tssr114729 12 101975366 to 101975371 5 + TSS region transcription start site region 114729
Tssr117383 12 101975683 to 101975746 63 - TSS region transcription start site region 117383
Tssr114730 12 101975725 to 101975751 26 + TSS region transcription start site region 114730
Cpsf2 12 101975764 to 102005993 30229 + protein coding gene cleavage and polyadenylation specific factor 2
Tssr117384 12 101975765 to 101975776 11 - TSS region transcription start site region 117384
Tssr3923 12 101975883 to 101975886 3 - TSS region transcription start site region 3923
Tssr117385 12 101975913 to 101975924 11 - TSS region transcription start site region 117385
Tssr117386 12 101975935 to 101975946 11 - TSS region transcription start site region 117386
Tssr114731 12 101975965 to 101976004 39 + TSS region transcription start site region 114731
Tssr117387 12 101975979 to 101975984 5 - TSS region transcription start site region 117387
Tssr114732 12 101976006 to 101976017 11 + TSS region transcription start site region 114732
Tssr117388 12 101976023 to 101976035 12 - TSS region transcription start site region 117388
Tssr117389 12 101976204 to 101976248 44 - TSS region transcription start site region 117389
Tssr117390 12 101976265 to 101976279 14 - TSS region transcription start site region 117390
Tssr117391 12 101976282 to 101976301 19 - TSS region transcription start site region 117391
Tssr117392 12 101976877 to 101976887 10 - TSS region transcription start site region 117392
Tssr117393 12 101976897 to 101976914 17 - TSS region transcription start site region 117393
Tssr114733 12 102005534 to 102005582 48 + TSS region transcription start site region 114733