Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:100371676-100873733

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc7b 12 100300770 to 100520822 220052 - protein coding gene tetratricopeptide repeat domain 7B
Gm48381 12 100440697 to 100444660 3963 - unclassified gene predicted gene, 48381
Tssr117323 12 100447290 to 100447291 1 - TSS region transcription start site region 117323
Gm48383 12 100465039 to 100488390 23351 + antisense lncRNA gene predicted gene, 48383
Gm36375 12 100487660 to 100493910 6250 - protein coding gene predicted gene, 36375
Cpgi4988 12 100499547 to 100499763 216 CpG island CpG island 4988
D12Mit98 12 100500769 to 100500902 133 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 98
Cpgi4989 12 100519902 to 100521353 1451 CpG island CpG island 4989
Tssr117324 12 100520778 to 100520853 75 - TSS region transcription start site region 117324
Rps6ka5 12 100549778 to 100725395 175617 - protein coding gene ribosomal protein S6 kinase, polypeptide 5
Ssrq6 12 100565816 to 102495006 1929190 QTL stress response QTL 6
Insq10 12 100565816 to 100565965 149 QTL insulin QTL 10
D12Mit231 12 100565816 to 100565965 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 231
Dbsty3 12 100565816 to 100565965 149 QTL diabesity 3
Tssr3920 12 100569859 to 100569860 1 + TSS region transcription start site region 3920
Gm49703 12 100571908 to 100573976 2068 - unclassified gene predicted gene, 49703
Gm48586 12 100621676 to 100623733 2057 - unclassified gene predicted gene, 48586
Gm48585 12 100624785 to 100626793 2008 - unclassified gene predicted gene, 48585
Tssr117325 12 100636581 to 100636584 3 - TSS region transcription start site region 117325
Cpgi4990 12 100724306 to 100725674 1368 CpG island CpG island 4990
Tssr117326 12 100724993 to 100725002 9 - TSS region transcription start site region 117326
Tssr117327 12 100725058 to 100725081 23 - TSS region transcription start site region 117327
Tssr114711 12 100729386 to 100729392 6 + TSS region transcription start site region 114711
Gm2614 12 100744533 to 100744935 402 - pseudogene predicted gene 2614
Tssr117328 12 100744963 to 100744965 2 - TSS region transcription start site region 117328
Gm40558 12 100763409 to 100777745 14336 + lncRNA gene predicted gene, 40558
Gm25801 12 100769023 to 100769128 105 - snRNA gene predicted gene, 25801
Tssr114712 12 100779055 to 100779065 10 + TSS region transcription start site region 114712
Dglucy 12 100779071 to 100872610 93539 + protein coding gene D-glutamate cyclase
Tssr114713 12 100779074 to 100779085 11 + TSS region transcription start site region 114713
Tssr114714 12 100779088 to 100779101 13 + TSS region transcription start site region 114714
Tssr114715 12 100779105 to 100779137 32 + TSS region transcription start site region 114715
Tssr114716 12 100779140 to 100779156 16 + TSS region transcription start site region 114716
Tssr117329 12 100837414 to 100837433 19 - TSS region transcription start site region 117329
Tssr114717 12 100856074 to 100856082 8 + TSS region transcription start site region 114717
Gm48771 12 100862786 to 100864689 1903 + unclassified gene predicted gene, 48771
Gm8482 12 100863969 to 100864439 470 - pseudogene predicted pseudogene 8482