Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98972943-99044189

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rara 11 98927818 to 98974942 47124 + protein coding gene retinoic acid receptor, alpha
Tssr104839 11 98974588 to 98974603 15 + TSS region transcription start site region 104839
Cpgi3786 11 98981547 to 98983409 1862 CpG island CpG island 3786
Gjd3 11 98982180 to 98983016 836 - protein coding gene gap junction protein, delta 3
Top2a 11 98992943 to 99024189 31246 - protein coding gene topoisomerase (DNA) II alpha
Tssr110612 11 98993712 to 98993715 3 - TSS region transcription start site region 110612
Tssr110613 11 98999227 to 98999240 13 - TSS region transcription start site region 110613
Gm26394 11 98999508 to 98999622 114 + snoRNA gene predicted gene, 26394
Tssr110614 11 99001053 to 99001070 17 - TSS region transcription start site region 110614
Tssr110615 11 99001394 to 99001397 3 - TSS region transcription start site region 110615
Tssr110616 11 99003042 to 99003071 29 - TSS region transcription start site region 110616
Tssr110617 11 99003559 to 99003563 4 - TSS region transcription start site region 110617
Gm23451 11 99017031 to 99017152 121 - snoRNA gene predicted gene, 23451
Cpgi3787 11 99023626 to 99024459 833 CpG island CpG island 3787
Tssr110618 11 99024179 to 99024197 18 - TSS region transcription start site region 110618
Cpgi3788 11 99040780 to 99042067 1287 CpG island CpG island 3788
Tssr104840 11 99041237 to 99041254 17 + TSS region transcription start site region 104840
Igfbp4 11 99041260 to 99052646 11386 + protein coding gene insulin-like growth factor binding protein 4
Tssr104841 11 99041262 to 99041267 5 + TSS region transcription start site region 104841
Tssr104842 11 99041897 to 99041938 41 + TSS region transcription start site region 104842