Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98362237-98463380

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stard3 11 98358368 to 98381112 22744 + protein coding gene START domain containing 3
Tssr104732 11 98371792 to 98371811 19 + TSS region transcription start site region 104732
Tssr104733 11 98371974 to 98371985 11 + TSS region transcription start site region 104733
Tssr104734 11 98377979 to 98377990 11 + TSS region transcription start site region 104734
Tcap 11 98383811 to 98384953 1142 + protein coding gene titin-cap
Tssr104735 11 98383816 to 98383832 16 + TSS region transcription start site region 104735
Tssr110532 11 98384797 to 98384812 15 - TSS region transcription start site region 110532
Cpgi3755 11 98386423 to 98387006 583 CpG island CpG island 3755
Tssr104736 11 98386616 to 98386633 17 + TSS region transcription start site region 104736
Pnmt 11 98386632 to 98388097 1465 + protein coding gene phenylethanolamine-N-methyltransferase
Pgap3 11 98388677 to 98400490 11813 - protein coding gene post-GPI attachment to proteins 3
Tssr110533 11 98399594 to 98399625 31 - TSS region transcription start site region 110533
Cpgi3756 11 98400113 to 98400643 530 CpG island CpG island 3756
Tssr110534 11 98400393 to 98400446 53 - TSS region transcription start site region 110534
Tssr110535 11 98400453 to 98400474 21 - TSS region transcription start site region 110535
Tssr104737 11 98400537 to 98400562 25 + TSS region transcription start site region 104737
Cpgi3757 11 98412237 to 98413380 1143 CpG island CpG island 3757
Tssr104738 11 98412376 to 98412388 12 + TSS region transcription start site region 104738
Tssr104739 11 98412461 to 98412566 105 + TSS region transcription start site region 104739
Erbb2 11 98412484 to 98437716 25232 + protein coding gene erb-b2 receptor tyrosine kinase 2
Gm25048 11 98423290 to 98423380 90 - snRNA gene predicted gene, 25048
Mien1 11 98437708 to 98438988 1280 - protein coding gene migration and invasion enhancer 1
Gm12352 11 98438037 to 98439046 1009 + antisense lncRNA gene predicted gene 12352
Cpgi3758 11 98438478 to 98439195 717 CpG island CpG island 3758
Tssr110536 11 98438708 to 98438776 68 - TSS region transcription start site region 110536
Tssr110537 11 98438941 to 98439008 67 - TSS region transcription start site region 110537
Tssr110538 11 98443961 to 98443966 5 - TSS region transcription start site region 110538
Tssr104740 11 98446826 to 98446869 43 + TSS region transcription start site region 104740
Grb7 11 98446834 to 98455373 8539 + protein coding gene growth factor receptor bound protein 7
Tssr104741 11 98447013 to 98447062 49 + TSS region transcription start site region 104741
Tssr104742 11 98447064 to 98447082 18 + TSS region transcription start site region 104742
Tssr104743 11 98447088 to 98447100 12 + TSS region transcription start site region 104743
Tssr104744 11 98447117 to 98447126 9 + TSS region transcription start site region 104744
Gm38975 11 98447515 to 98459816 12301 - lncRNA gene predicted gene, 38975
Tssr104745 11 98451833 to 98451839 6 + TSS region transcription start site region 104745
Cpgi3759 11 98457377 to 98458542 1165 CpG island CpG island 3759
Tssr110539 11 98457998 to 98458019 21 - TSS region transcription start site region 110539
Tssr104746 11 98458003 to 98458009 6 + TSS region transcription start site region 104746
Tssr104747 11 98458297 to 98458307 10 + TSS region transcription start site region 104747