Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:98327658-98358090

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neurod2 11 98325417 to 98329645 4228 - protein coding gene neurogenic differentiation 2
Cpgi3749 11 98326845 to 98329765 2920 CpG island CpG island 3749
Tssr110526 11 98328172 to 98328199 27 - TSS region transcription start site region 110526
Tssr110527 11 98328343 to 98328357 14 - TSS region transcription start site region 110527
Tssr110528 11 98329604 to 98329637 33 - TSS region transcription start site region 110528
Tssr110529 11 98329641 to 98329654 13 - TSS region transcription start site region 110529
Cpgi3750 11 98334080 to 98334852 772 CpG island CpG island 3750
Gm33099 11 98334454 to 98340908 6454 + protein coding gene predicted gene, 33099
Cpgi3751 11 98338373 to 98339660 1287 CpG island CpG island 3751
Gm38970 11 98342122 to 98343859 1737 + lncRNA gene predicted gene, 38970
Cpgi3752 11 98342658 to 98343090 432 CpG island CpG island 3752
Cpgi3753 11 98348105 to 98349469 1364 CpG island CpG island 3753
Ppp1r1b 11 98348406 to 98357796 9390 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 1B
Tssr104714 11 98348428 to 98348434 6 + TSS region transcription start site region 104714
Tssr104715 11 98348466 to 98348473 7 + TSS region transcription start site region 104715
Tssr104716 11 98348638 to 98348641 3 + TSS region transcription start site region 104716
Tssr104717 11 98348662 to 98348742 80 + TSS region transcription start site region 104717
Tssr104718 11 98348752 to 98348763 11 + TSS region transcription start site region 104718
Tssr104719 11 98348764 to 98348779 15 + TSS region transcription start site region 104719
Tssr104720 11 98349053 to 98349069 16 + TSS region transcription start site region 104720
Tssr104721 11 98350443 to 98350453 10 + TSS region transcription start site region 104721
1700003D09Rik 11 98350718 to 98358283 7565 - lncRNA gene RIKEN cDNA 1700003D09 gene
Tssr104722 11 98355309 to 98355320 11 + TSS region transcription start site region 104722
Tssr104723 11 98355322 to 98355330 8 + TSS region transcription start site region 104723
Tssr104724 11 98355335 to 98355346 11 + TSS region transcription start site region 104724
Tssr104725 11 98355349 to 98355362 13 + TSS region transcription start site region 104725
Tssr104726 11 98356712 to 98356726 14 + TSS region transcription start site region 104726
Tssr104727 11 98356727 to 98356738 11 + TSS region transcription start site region 104727
Tssr104728 11 98357038 to 98357079 41 + TSS region transcription start site region 104728