Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97846444-97996446

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo47 11 97853826 to 97884154 30328 - protein coding gene F-box protein 47
Tssr110487 11 97855535 to 97855562 27 - TSS region transcription start site region 110487
Cpgi3727 11 97883522 to 97884351 829 CpG island CpG island 3727
Tssr110488 11 97884122 to 97884139 17 - TSS region transcription start site region 110488
Tssr104688 11 97884538 to 97884549 11 + TSS region transcription start site region 104688
Tssr104689 11 97884580 to 97884594 14 + TSS region transcription start site region 104689
Gm11630 11 97884594 to 97893811 9217 + lincRNA gene predicted gene 11630
Tssr104690 11 97921444 to 97921446 2 + TSS region transcription start site region 104690
Cpgi3728 11 97923032 to 97923311 279 CpG island CpG island 3728
Plxdc1 11 97923238 to 97986444 63206 - protein coding gene plexin domain containing 1
Gm22461 11 97941671 to 97941740 69 - miRNA gene predicted gene, 22461
Tssr110489 11 97949637 to 97949658 21 - TSS region transcription start site region 110489
Tssr110490 11 97954956 to 97954972 16 - TSS region transcription start site region 110490
Tssr110491 11 97955268 to 97955310 42 - TSS region transcription start site region 110491
Cpgi3729 11 97966868 to 97967086 218 CpG island CpG island 3729
Gm11633 11 97968792 to 97969235 443 + pseudogene predicted gene 11633
Cpgi3730 11 97985729 to 97987047 1318 CpG island CpG island 3730
Tssr110492 11 97986384 to 97986472 88 - TSS region transcription start site region 110492
Cpgi3731 11 97987680 to 97987990 310 CpG island CpG island 3731
n-TCgca55 11 97988246 to 97988317 71 - tRNA gene nuclear encoded tRNA cysteine 55 (anticodon GCA)
Cpgi3732 11 97988420 to 97988911 491 CpG island CpG island 3732
Tssr110493 11 97988690 to 97988702 12 - TSS region transcription start site region 110493
Tssr110494 11 97988708 to 97988723 15 - TSS region transcription start site region 110494
n-TCgca54 11 97988923 to 97988994 71 - tRNA gene nuclear encoded tRNA cysteine 54 (anticodon GCA)
Arl5c 11 97989578 to 97996181 6603 - protein coding gene ADP-ribosylation factor-like 5C
Cpgi3733 11 97994719 to 97995719 1000 CpG island CpG island 3733
Tssr104691 11 97995050 to 97995058 8 + TSS region transcription start site region 104691
Cpgi3734 11 97995783 to 97996068 285 CpG island CpG island 3734
Tssr110495 11 97995863 to 97995935 72 - TSS region transcription start site region 110495
Tssr110496 11 97996052 to 97996075 23 - TSS region transcription start site region 110496
Tssr110497 11 97996171 to 97996190 19 - TSS region transcription start site region 110497