Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97746481-97800918

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cwc25 11 97745481 to 97766556 21075 - protein coding gene CWC25 spliceosome-associated protein
Cpgi3722 11 97766345 to 97766907 562 CpG island CpG island 3722
Tssr110481 11 97766480 to 97766487 7 - TSS region transcription start site region 110481
Tssr110482 11 97766508 to 97766574 66 - TSS region transcription start site region 110482
Tssr104657 11 97766628 to 97766687 59 + TSS region transcription start site region 104657
Tssr104658 11 97766826 to 97766860 34 + TSS region transcription start site region 104658
Atp5l2-ps 11 97768060 to 97768371 311 + pseudogene ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene
n-TCgca18 11 97769829 to 97769900 71 - tRNA gene nuclear encoded tRNA cysteine 18 (anticodon GCA)
1700001P01Rik 11 97771481 to 97775918 4437 - protein coding gene RIKEN cDNA 1700001P01 gene
Tssr104659 11 97775383 to 97775394 11 + TSS region transcription start site region 104659
Cpgi3723 11 97775475 to 97775850 375 CpG island CpG island 3723
Tssr110483 11 97775876 to 97775899 23 - TSS region transcription start site region 110483
Rpl23 11 97777527 to 97782437 4910 - protein coding gene ribosomal protein L23
Gm27326 11 97780182 to 97780276 94 - snoRNA gene predicted gene, 27326
Tssr3663 11 97780798 to 97780801 3 + TSS region transcription start site region 3663
Snora21 11 97781639 to 97781766 127 - snoRNA gene small nucleolar RNA, H/ACA box 21
Cpgi3724 11 97781775 to 97782743 968 CpG island CpG island 3724
Tssr110484 11 97782377 to 97782399 22 - TSS region transcription start site region 110484
Tssr110485 11 97782409 to 97782420 11 - TSS region transcription start site region 110485
n-TCgca56 11 97797072 to 97797143 71 + tRNA gene nuclear encoded tRNA cysteine 56 (anticodon GCA)
n-TCgca51 11 97798906 to 97798977 71 - tRNA gene nuclear encoded tRNA cysteine 51 (anticodon GCA)
Tssr104660 11 97798995 to 97799021 26 + TSS region transcription start site region 104660
Lasp1 11 97799005 to 97838765 39760 + protein coding gene LIM and SH3 protein 1
Cpgi3725 11 97799017 to 97800593 1576 CpG island CpG island 3725
Tssr104661 11 97799324 to 97799335 11 + TSS region transcription start site region 104661
Tssr104662 11 97799390 to 97799401 11 + TSS region transcription start site region 104662
Tssr104663 11 97799574 to 97799581 7 + TSS region transcription start site region 104663
Tssr104664 11 97799586 to 97799597 11 + TSS region transcription start site region 104664
Tssr104665 11 97799608 to 97799619 11 + TSS region transcription start site region 104665
Tssr104666 11 97799627 to 97799647 20 + TSS region transcription start site region 104666
Tssr104667 11 97799661 to 97799709 48 + TSS region transcription start site region 104667
Tssr104668 11 97799760 to 97799771 11 + TSS region transcription start site region 104668
Tssr104669 11 97799772 to 97799781 9 + TSS region transcription start site region 104669