MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:96770318-96790325

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snx11	11	96767555 to 96777559	10004	-	protein coding gene	sorting nexin 11
Tssr110339	11	96773345 to 96773352	7	-	TSS region	transcription start site region 110339
Tssr110340	11	96773359 to 96773366	7	-	TSS region	transcription start site region 110340
Tssr110341	11	96773377 to 96773388	11	-	TSS region	transcription start site region 110341
Tssr3659	11	96773402 to 96773413	11	-	TSS region	transcription start site region 3659
Cpgi3667	11	96777220 to 96777910	690		CpG island	CpG island 3667
Tssr110342	11	96777478 to 96777479	1	-	TSS region	transcription start site region 110342
Tssr110343	11	96777497 to 96777546	49	-	TSS region	transcription start site region 110343
Tssr104568	11	96777841 to 96777864	23	+	TSS region	transcription start site region 104568
Tssr110344	11	96780318 to 96780325	7	-	TSS region	transcription start site region 110344
Tssr110345	11	96780341 to 96780355	14	-	TSS region	transcription start site region 110345
Cpgi3668	11	96788840 to 96789811	971		CpG island	CpG island 3668
Tssr110346	11	96788988 to 96789008	20	-	TSS region	transcription start site region 110346
Tssr104569	11	96789118 to 96789146	28	+	TSS region	transcription start site region 104569
Cbx1	11	96789127 to 96808640	19513	+	protein coding gene	chromobox 1
Tssr104570	11	96789149 to 96789206	57	+	TSS region	transcription start site region 104570
Tssr104571	11	96789213 to 96789224	11	+	TSS region	transcription start site region 104571
Tssr104572	11	96789235 to 96789254	19	+	TSS region	transcription start site region 104572