Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96312165-96322274

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr104506 11 96314658 to 96314664 6 + TSS region transcription start site region 104506
Cpgi3645 11 96314763 to 96315078 315 CpG island CpG island 3645
Tssr104507 11 96314779 to 96314790 11 + TSS region transcription start site region 104507
Tssr104508 11 96314796 to 96314835 39 + TSS region transcription start site region 104508
Mir10a 11 96317165 to 96317274 109 + miRNA gene microRNA 10a
Cpgi3646 11 96317901 to 96318182 281 CpG island CpG island 3646
Hoxb4 11 96318267 to 96321638 3371 + protein coding gene homeobox B4
Del(11Hoxb3-Hoxb4)1Karl 11 96318267 to 96347930 29663 cytogenetic marker deletion, Chr 11, Stefan Karlsson 1
Cpgi3647 11 96318592 to 96319551 959 CpG island CpG island 3647
Tssr104509 11 96318650 to 96318718 68 + TSS region transcription start site region 104509
Tssr104510 11 96318731 to 96318745 14 + TSS region transcription start site region 104510
Tssr104511 11 96318755 to 96318775 20 + TSS region transcription start site region 104511
Tssr104512 11 96318828 to 96318845 17 + TSS region transcription start site region 104512
Tssr104513 11 96318861 to 96318872 11 + TSS region transcription start site region 104513
Cpgi3648 11 96319953 to 96320391 438 CpG island CpG island 3648
Cpgi3649 11 96320676 to 96320975 299 CpG island CpG island 3649