Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96289537-96300040

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxb7 11 96286646 to 96290163 3517 + protein coding gene homeobox B7
Cpgi3638 11 96289376 to 96289622 246 CpG island CpG island 3638
Hoxb5os 11 96291037 to 96306910 15873 - antisense lncRNA gene homeobox B5 and homeobox B6, opposite strand
Tssr104478 11 96292153 to 96292159 6 + TSS region transcription start site region 104478
Tssr104479 11 96292453 to 96292508 55 + TSS region transcription start site region 104479
Hoxb6 11 96292710 to 96301569 8859 + protein coding gene homeobox B6
Cpgi3639 11 96293302 to 96293604 302 CpG island CpG island 3639
Cpgi3640 11 96294537 to 96295040 503 CpG island CpG island 3640
2700088M07Rik 11 96294853 to 96295406 553 unclassified gene RIKEN cDNA 2700088M07 gene
Tssr110326 11 96295405 to 96295407 2 - TSS region transcription start site region 110326
Tssr104480 11 96298754 to 96298770 16 + TSS region transcription start site region 104480
Tssr104481 11 96298784 to 96298798 14 + TSS region transcription start site region 104481
Tssr104482 11 96298805 to 96298821 16 + TSS region transcription start site region 104482
Cpgi3641 11 96298925 to 96300141 1216 CpG island CpG island 3641
Tssr104483 11 96299046 to 96299083 37 + TSS region transcription start site region 104483
Tssr104484 11 96299089 to 96299102 13 + TSS region transcription start site region 104484
Tssr104485 11 96299112 to 96299129 17 + TSS region transcription start site region 104485
Tssr104486 11 96299137 to 96299148 11 + TSS region transcription start site region 104486
Tssr104487 11 96299207 to 96299222 15 + TSS region transcription start site region 104487
Tssr104488 11 96299223 to 96299252 29 + TSS region transcription start site region 104488
Tssr3658 11 96299253 to 96299265 12 + TSS region transcription start site region 3658