Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96284376-96294622

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mvwf 11 95568818 to 96285776 716958 QTL modifier of von Willebrand factor
Hoxb8 11 96281905 to 96285315 3410 + protein coding gene homeobox B8
Cpgi3635 11 96284014 to 96285002 988 CpG island CpG island 3635
Tssr104471 11 96284772 to 96284786 14 + TSS region transcription start site region 104471
Tssr104472 11 96285227 to 96285230 3 + TSS region transcription start site region 104472
Tssr104473 11 96285568 to 96285591 23 + TSS region transcription start site region 104473
Tssr104474 11 96285593 to 96285627 34 + TSS region transcription start site region 104474
D11Mit54 11 96285639 to 96285776 137 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 54
Cpgi3636 11 96285838 to 96286008 170 CpG island CpG island 3636
Tssr104475 11 96286638 to 96286653 15 + TSS region transcription start site region 104475
Hoxb7 11 96286646 to 96290163 3517 + protein coding gene homeobox B7
Cpgi3637 11 96286712 to 96287477 765 CpG island CpG island 3637
Tssr104476 11 96286778 to 96286791 13 + TSS region transcription start site region 104476
Tssr104477 11 96287056 to 96287079 23 + TSS region transcription start site region 104477
Cpgi3638 11 96289376 to 96289622 246 CpG island CpG island 3638
Tssr110325 11 96289525 to 96289528 3 - TSS region transcription start site region 110325
Hoxb5os 11 96291037 to 96306910 15873 - antisense lncRNA gene homeobox B5 and homeobox B6, opposite strand
Tssr104478 11 96292153 to 96292159 6 + TSS region transcription start site region 104478
Tssr104479 11 96292453 to 96292508 55 + TSS region transcription start site region 104479
Hoxb6 11 96292710 to 96301569 8859 + protein coding gene homeobox B6
Cpgi3639 11 96293302 to 96293604 302 CpG island CpG island 3639
Cpgi3640 11 96294537 to 96295040 503 CpG island CpG island 3640
Pas5b 11 108915558 to 96285639 -12629919 QTL pulmonary adenoma susceptibility 5b