Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96130176-96270311

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttll6 11 96133786 to 96165451 31665 + protein coding gene tubulin tyrosine ligase-like family, member 6
Gm30084 11 96136357 to 96141216 4859 - lncRNA gene predicted gene, 30084
D11Moh24 11 96147064 to 96147325 261 DNA segment DNA segment, Chr 11, KL Mohlke 24
Tssr110323 11 96147641 to 96147646 5 - TSS region transcription start site region 110323
Cpgi3617 11 96153143 to 96153387 244 CpG island CpG island 3617
D11Moh26 11 96169127 to 96169329 202 DNA segment DNA segment, Chr 11, KL Mohlke 26
Cpgi3618 11 96170776 to 96171048 272 CpG island CpG island 3618
Cpgi3619 11 96173113 to 96173414 301 CpG island CpG island 3619
Cpgi3620 11 96175445 to 96175724 279 CpG island CpG island 3620
Tssr104431 11 96177363 to 96177366 3 + TSS region transcription start site region 104431
Gm11535 11 96177551 to 96178800 1249 + lincRNA gene predicted gene 11535
Cpgi3621 11 96177606 to 96178105 499 CpG island CpG island 3621
D11Moh27 11 96177698 to 96177927 229 DNA segment DNA segment, Chr 11, KL Mohlke 27
Cpgi3622 11 96189940 to 96190354 414 CpG island CpG island 3622
Cpgi3623 11 96194170 to 96194950 780 CpG island CpG island 3623
Tssr104432 11 96194279 to 96194287 8 + TSS region transcription start site region 104432
Tssr104433 11 96194299 to 96194314 15 + TSS region transcription start site region 104433
Tssr104434 11 96194319 to 96194326 7 + TSS region transcription start site region 104434
Tssr104435 11 96194336 to 96194351 15 + TSS region transcription start site region 104435
Hoxb13 11 96194361 to 96196599 2238 + protein coding gene homeobox B13
Tssr104436 11 96194367 to 96194379 12 + TSS region transcription start site region 104436
Cpgi3624 11 96195848 to 96196136 288 CpG island CpG island 3624
Gm30134 11 96199135 to 96203626 4491 - lncRNA gene predicted gene, 30134
Gm27898 11 96199751 to 96199830 79 - unclassified non-coding RNA gene predicted gene, 27898
Gm27605 11 96200176 to 96200311 135 - unclassified non-coding RNA gene predicted gene, 27605
Cpgi3625 11 96203258 to 96203837 579 CpG island CpG island 3625
Tssr104437 11 96203441 to 96203458 17 + TSS region transcription start site region 104437
Gm11538 11 96203454 to 96205480 2026 + lncRNA gene predicted gene 11538
Tssr104438 11 96248594 to 96248602 8 + TSS region transcription start site region 104438
Gm11539 11 96248633 to 96249189 556 + pseudogene predicted gene 11539
Tssr104439 11 96251100 to 96251111 11 + TSS region transcription start site region 104439
Tssr104440 11 96251172 to 96251226 54 + TSS region transcription start site region 104440
Tssr104441 11 96251227 to 96251234 7 + TSS region transcription start site region 104441
Tssr104442 11 96251239 to 96251253 14 + TSS region transcription start site region 104442
Tssr104443 11 96251273 to 96251282 9 + TSS region transcription start site region 104443
Cpgi3626 11 96251465 to 96252137 672 CpG island CpG island 3626
Tssr104444 11 96251638 to 96251668 30 + TSS region transcription start site region 104444
Gm53 11 96251660 to 96264484 12824 + lincRNA gene predicted gene 53
Tssr104445 11 96251674 to 96251696 22 + TSS region transcription start site region 104445
Tssr104446 11 96251759 to 96251774 15 + TSS region transcription start site region 104446
Cpgi3627 11 96255293 to 96255957 664 CpG island CpG island 3627
Cpgi3628 11 96260274 to 96260621 347 CpG island CpG island 3628
Cpgi3629 11 96261471 to 96261911 440 CpG island CpG island 3629
Tssr104447 11 96263891 to 96263911 20 + TSS region transcription start site region 104447
Tssr104448 11 96264268 to 96264284 16 + TSS region transcription start site region 104448
Tssr3657 11 96264317 to 96264326 9 + TSS region transcription start site region 3657
Mir196a-1 11 96265164 to 96265265 101 + miRNA gene microRNA 196a-1
Cpgi3630 11 96270114 to 96270312 198 CpG island CpG island 3630