Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96006130-96106320

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3610 11 96004420 to 96006253 1833 CpG island CpG island 3610
Gm29202 11 96005889 to 96008055 2166 + antisense lncRNA gene predicted gene 29202
Tssr110309 11 96006157 to 96006173 16 - TSS region transcription start site region 110309
Gm37179 11 96006333 to 96007155 822 - unclassified gene predicted gene, 37179
Cpgi3611 11 96006370 to 96007974 1604 CpG island CpG island 3611
Tssr110310 11 96006983 to 96007019 36 - TSS region transcription start site region 110310
Tssr104420 11 96007322 to 96007343 21 + TSS region transcription start site region 104420
Tssr104421 11 96024540 to 96024558 18 + TSS region transcription start site region 104421
Gip 11 96024545 to 96030831 6286 + protein coding gene gastric inhibitory polypeptide
Gm24949 11 96032678 to 96032892 214 + snoRNA gene predicted gene, 24949
Cpgi3612 11 96034618 to 96035374 756 CpG island CpG island 3612
Snf8 11 96034890 to 96047430 12540 + protein coding gene SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
Tssr104422 11 96034906 to 96034952 46 + TSS region transcription start site region 104422
Ube2z 11 96047431 to 96065364 17933 - protein coding gene ubiquitin-conjugating enzyme E2Z
Tssr110311 11 96050219 to 96050253 34 - TSS region transcription start site region 110311
D11Moh21 11 96056130 to 96056320 190 DNA segment DNA segment, Chr 11, KL Mohlke 21
Cpgi3613 11 96064441 to 96066027 1586 CpG island CpG island 3613
Tssr110312 11 96064997 to 96065029 32 - TSS region transcription start site region 110312
Tssr110313 11 96065272 to 96065307 35 - TSS region transcription start site region 110313
Tssr110314 11 96065315 to 96065327 12 - TSS region transcription start site region 110314
Tssr110315 11 96065333 to 96065344 11 - TSS region transcription start site region 110315
Tssr110316 11 96065350 to 96065369 19 - TSS region transcription start site region 110316
Atp5g1 11 96072793 to 96075694 2901 - protein coding gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
Tssr110317 11 96073023 to 96073039 16 - TSS region transcription start site region 110317
Cpgi3614 11 96075211 to 96076243 1032 CpG island CpG island 3614
Tssr110318 11 96075367 to 96075402 35 - TSS region transcription start site region 110318
Tssr110319 11 96075596 to 96075636 40 - TSS region transcription start site region 110319
Tssr110320 11 96075655 to 96075677 22 - TSS region transcription start site region 110320
Tssr104423 11 96076098 to 96076130 32 + TSS region transcription start site region 104423
Tssr104424 11 96081069 to 96081090 21 + TSS region transcription start site region 104424
Tssr104425 11 96081178 to 96081216 38 + TSS region transcription start site region 104425
Gm22423 11 96083673 to 96083856 183 - snRNA gene predicted gene, 22423
Cpgi3615 11 96086524 to 96086745 221 CpG island CpG island 3615
Tssr104426 11 96096967 to 96096971 4 + TSS region transcription start site region 104426
Calcoco2 11 96099326 to 96111964 12638 - protein coding gene calcium binding and coiled-coil domain 2
D11Moh23 11 96105838 to 96106290 452 DNA segment DNA segment, Chr 11, KL Mohlke 23