Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95344080-95563406

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam117a 11 95337018 to 95381872 44854 + protein coding gene family with sequence similarity 117, member A
Tssr104357 11 95352737 to 95352741 4 + TSS region transcription start site region 104357
Tssr110267 11 95356709 to 95356722 13 - TSS region transcription start site region 110267
Tssr110268 11 95356794 to 95356838 44 - TSS region transcription start site region 110268
Gm29477 11 95375525 to 95384507 8982 - antisense lncRNA gene predicted gene 29477
Tssr104358 11 95377592 to 95377608 16 + TSS region transcription start site region 104358
Cpgi3590 11 95384336 to 95385173 837 CpG island CpG island 3590
Tssr104359 11 95384662 to 95384682 20 + TSS region transcription start site region 104359
Tssr104360 11 95384885 to 95384918 33 + TSS region transcription start site region 104360
Slc35b1 11 95384891 to 95391776 6885 + protein coding gene solute carrier family 35, member B1
Tssr104361 11 95384919 to 95384944 25 + TSS region transcription start site region 104361
Tssr104362 11 95384946 to 95384957 11 + TSS region transcription start site region 104362
D11Lis3 11 95413118 to 95413304 186 DNA segment DNA segment, Chr 11, Lisse 3
Cpgi3591 11 95413686 to 95415046 1360 CpG island CpG island 3591
Tssr104363 11 95413786 to 95413815 29 + TSS region transcription start site region 104363
Tssr104364 11 95414078 to 95414130 52 + TSS region transcription start site region 104364
Spop 11 95414080 to 95493406 79326 + protein coding gene speckle-type POZ protein
Tssr104365 11 95440494 to 95440500 6 + TSS region transcription start site region 104365
D11Moh33 11 95441624 to 95441787 163 DNA segment DNA segment, Chr 11, KL Mohlke 33
Gm11522 11 95462546 to 95462721 175 - pseudogene predicted gene 11522
Tssr104366 11 95480465 to 95480473 8 + TSS region transcription start site region 104366
Nxph3 11 95509846 to 95514565 4719 - protein coding gene neurexophilin 3
Cpgi3592 11 95510950 to 95511280 330 CpG island CpG island 3592
Cpgi3593 11 95513386 to 95515257 1871 CpG island CpG island 3593
Tssr110269 11 95514541 to 95514594 53 - TSS region transcription start site region 110269
Tssr110270 11 95514695 to 95514707 12 - TSS region transcription start site region 110270
Cpgi3594 11 95520766 to 95521792 1026 CpG island CpG island 3594
D11Moh32 11 95530237 to 95530365 128 DNA segment DNA segment, Chr 11, KL Mohlke 32
Cpgi3595 11 95533713 to 95534186 473 CpG island CpG island 3595