Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95257592-95497608

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3587 11 95258546 to 95259959 1413 CpG island CpG island 3587
Tac4 11 95261529 to 95269262 7733 + protein coding gene tachykinin 4
Kat7 11 95274259 to 95310246 35987 - protein coding gene K(lysine) acetyltransferase 7
Tssr110262 11 95274756 to 95274811 55 - TSS region transcription start site region 110262
Cpgi3588 11 95309417 to 95310631 1214 CpG island CpG island 3588
Tssr110263 11 95309557 to 95309586 29 - TSS region transcription start site region 110263
Tssr110264 11 95309682 to 95309712 30 - TSS region transcription start site region 110264
Tssr110265 11 95309718 to 95309732 14 - TSS region transcription start site region 110265
Tssr104352 11 95309870 to 95309911 41 + TSS region transcription start site region 104352
Tssr110266 11 95310186 to 95310213 27 - TSS region transcription start site region 110266
Tssr104353 11 95310304 to 95310338 34 + TSS region transcription start site region 104353
Gm11520 11 95322885 to 95324594 1709 + antisense lncRNA gene predicted gene 11520
Gm11521 11 95336011 to 95337408 1397 - antisense lncRNA gene predicted gene 11521
Cpgi3589 11 95336881 to 95337752 871 CpG island CpG island 3589
Tssr104354 11 95337012 to 95337026 14 + TSS region transcription start site region 104354
Fam117a 11 95337018 to 95381872 44854 + protein coding gene family with sequence similarity 117, member A
Tssr104355 11 95339925 to 95339938 13 + TSS region transcription start site region 104355
Tssr104356 11 95340006 to 95340011 5 + TSS region transcription start site region 104356
Tssr104357 11 95352737 to 95352741 4 + TSS region transcription start site region 104357
Tssr110267 11 95356709 to 95356722 13 - TSS region transcription start site region 110267
Tssr110268 11 95356794 to 95356838 44 - TSS region transcription start site region 110268
Gm29477 11 95375525 to 95384507 8982 - antisense lncRNA gene predicted gene 29477
Tssr104358 11 95377592 to 95377608 16 + TSS region transcription start site region 104358
Cpgi3590 11 95384336 to 95385173 837 CpG island CpG island 3590
Tssr104359 11 95384662 to 95384682 20 + TSS region transcription start site region 104359
Tssr104360 11 95384885 to 95384918 33 + TSS region transcription start site region 104360
Slc35b1 11 95384891 to 95391776 6885 + protein coding gene solute carrier family 35, member B1
Tssr104361 11 95384919 to 95384944 25 + TSS region transcription start site region 104361
Tssr104362 11 95384946 to 95384957 11 + TSS region transcription start site region 104362
D11Lis3 11 95413118 to 95413304 186 DNA segment DNA segment, Chr 11, Lisse 3
Cpgi3591 11 95413686 to 95415046 1360 CpG island CpG island 3591
Tssr104363 11 95413786 to 95413815 29 + TSS region transcription start site region 104363
Tssr104364 11 95414078 to 95414130 52 + TSS region transcription start site region 104364
Spop 11 95414080 to 95493406 79326 + protein coding gene speckle-type POZ protein
Tssr104365 11 95440494 to 95440500 6 + TSS region transcription start site region 104365
D11Moh33 11 95441624 to 95441787 163 DNA segment DNA segment, Chr 11, KL Mohlke 33
Gm11522 11 95462546 to 95462721 175 - pseudogene predicted gene 11522
Tssr104366 11 95480465 to 95480473 8 + TSS region transcription start site region 104366