Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94998742-95058770

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgth12 11 4000000 to 95000000 91000000 QTL body length 12
Ppp1r9b 11 94991212 to 95006898 15686 + protein coding gene protein phosphatase 1, regulatory subunit 9B
Tssr104325 11 95006323 to 95006335 12 + TSS region transcription start site region 104325
Tssr104326 11 95006350 to 95006369 19 + TSS region transcription start site region 104326
Tssr104327 11 95006432 to 95006457 25 + TSS region transcription start site region 104327
Cpgi3571 11 95009606 to 95010661 1055 CpG island CpG island 3571
Tssr104328 11 95009764 to 95009782 18 + TSS region transcription start site region 104328
Tssr104329 11 95009852 to 95009890 38 + TSS region transcription start site region 104329
Samd14 11 95009879 to 95026087 16208 + protein coding gene sterile alpha motif domain containing 14
Tssr104330 11 95009898 to 95009919 21 + TSS region transcription start site region 104330
Tssr104331 11 95009936 to 95009947 11 + TSS region transcription start site region 104331
Tssr104332 11 95009960 to 95009963 3 + TSS region transcription start site region 104332
Tssr104333 11 95009966 to 95010029 63 + TSS region transcription start site region 104333
Tssr104334 11 95010075 to 95010086 11 + TSS region transcription start site region 104334
Tssr104335 11 95010100 to 95010115 15 + TSS region transcription start site region 104335
Tssr104336 11 95010176 to 95010185 9 + TSS region transcription start site region 104336
Tssr104337 11 95010244 to 95010276 32 + TSS region transcription start site region 104337
Tssr104338 11 95010277 to 95010293 16 + TSS region transcription start site region 104338
Tssr110238 11 95010293 to 95010325 32 - TSS region transcription start site region 110238
Tssr104339 11 95010297 to 95010365 68 + TSS region transcription start site region 104339
Tssr104340 11 95010366 to 95010379 13 + TSS region transcription start site region 104340
Tssr104341 11 95010384 to 95010419 35 + TSS region transcription start site region 104341
Tssr104342 11 95010472 to 95010483 11 + TSS region transcription start site region 104342
Tssr110239 11 95012192 to 95012207 15 - TSS region transcription start site region 110239
Cpgi3572 11 95019844 to 95020346 502 CpG island CpG island 3572
Cpgi3573 11 95024596 to 95024820 224 CpG island CpG island 3573
Pdk2 11 95026258 to 95041354 15096 - protein coding gene pyruvate dehydrogenase kinase, isoenzyme 2
Tssr110240 11 95026699 to 95026714 15 - TSS region transcription start site region 110240
Tssr110241 11 95028742 to 95028770 28 - TSS region transcription start site region 110241
Gm11513 11 95032759 to 95038283 5524 + antisense lncRNA gene predicted gene 11513
Tssr110242 11 95032988 to 95032993 5 - TSS region transcription start site region 110242
Tssr110243 11 95040506 to 95040543 37 - TSS region transcription start site region 110243
Tssr110244 11 95040548 to 95040565 17 - TSS region transcription start site region 110244
Tssr110245 11 95040579 to 95040610 31 - TSS region transcription start site region 110245
Cpgi3574 11 95040640 to 95041710 1070 CpG island CpG island 3574
Tssr104343 11 95040722 to 95040735 13 + TSS region transcription start site region 104343
Tssr110246 11 95041266 to 95041271 5 - TSS region transcription start site region 110246
Tssr110247 11 95041276 to 95041297 21 - TSS region transcription start site region 110247
Tssr110248 11 95041308 to 95041330 22 - TSS region transcription start site region 110248
Tssr110249 11 95041335 to 95041374 39 - TSS region transcription start site region 110249
Tssr110250 11 95041391 to 95041407 16 - TSS region transcription start site region 110250
Itga3 11 95044474 to 95076801 32327 - protein coding gene integrin alpha 3
D11Lis2 11 95052290 to 95052442 152 DNA segment DNA segment, Chr 11, Lisse 2
Tssr104344 11 95057084 to 95057094 10 + TSS region transcription start site region 104344
Tssr104345 11 95057099 to 95057119 20 + TSS region transcription start site region 104345