Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94481299-94561323

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spata20 11 94478904 to 94485310 6406 - protein coding gene spermatogenesis associated 20
Cpgi3552 11 94483452 to 94483667 215 CpG island CpG island 3552
Tssr110181 11 94485275 to 94485281 6 - TSS region transcription start site region 110181
Tssr110182 11 94485290 to 94485327 37 - TSS region transcription start site region 110182
Tssr110183 11 94485331 to 94485356 25 - TSS region transcription start site region 110183
Cpgi3553 11 94485969 to 94486370 401 CpG island CpG island 3553
Tssr110184 11 94486211 to 94486221 10 - TSS region transcription start site region 110184
Tssr110185 11 94486224 to 94486234 10 - TSS region transcription start site region 110185
Tssr110186 11 94486242 to 94486264 22 - TSS region transcription start site region 110186
Epn3 11 94489599 to 94499974 10375 - protein coding gene epsin 3
Cpgi3554 11 94490871 to 94491760 889 CpG island CpG island 3554
Tssr110187 11 94491344 to 94491372 28 - TSS region transcription start site region 110187
Tssr110188 11 94498170 to 94498191 21 - TSS region transcription start site region 110188
Tssr110189 11 94498193 to 94498207 14 - TSS region transcription start site region 110189
Cpgi3555 11 94499756 to 94500113 357 CpG island CpG island 3555
Tssr110190 11 94499883 to 94499959 76 - TSS region transcription start site region 110190
Tssr110191 11 94499962 to 94500002 40 - TSS region transcription start site region 110191
Mycbpap 11 94501347 to 94521742 20395 - protein coding gene MYCBP associated protein
Gm35650 11 94507162 to 94518588 11426 + lncRNA gene predicted gene, 35650
Tssr110192 11 94507288 to 94507299 11 - TSS region transcription start site region 110192
Tssr110193 11 94507337 to 94507345 8 - TSS region transcription start site region 110193
Tssr104206 11 94507436 to 94507451 15 + TSS region transcription start site region 104206
Tssr104207 11 94507460 to 94507474 14 + TSS region transcription start site region 104207
Tssr104208 11 94507488 to 94507500 12 + TSS region transcription start site region 104208
Tssr110194 11 94508347 to 94508349 2 - TSS region transcription start site region 110194
Tssr110195 11 94509796 to 94509797 1 - TSS region transcription start site region 110195
Tssr110196 11 94509813 to 94509825 12 - TSS region transcription start site region 110196
Cpgi3556 11 94520992 to 94521752 760 CpG island CpG island 3556
Tssr110197 11 94521299 to 94521323 24 - TSS region transcription start site region 110197
Tssr110198 11 94521324 to 94521349 25 - TSS region transcription start site region 110198
Tssr110199 11 94521472 to 94521516 44 - TSS region transcription start site region 110199
Rsad1 11 94539798 to 94549255 9457 - protein coding gene radical S-adenosyl methionine domain containing 1
Heal10 11 94546357 to 94546496 139 QTL wound healing/regeneration 10
Heal25 11 94546357 to 94546496 139 QTL wound healing/regeneration 25
D11Mit213 11 94546357 to 94546496 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 213
Cpgi3557 11 94548401 to 94549421 1020 CpG island CpG island 3557
Tssr110200 11 94549165 to 94549222 57 - TSS region transcription start site region 110200
Acsf2 11 94557102 to 94601871 44769 - protein coding gene acyl-CoA synthetase family member 2
Dbm2 11 118131898 to 94546357 -23585541 QTL diabetes modifier 2