Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87797987-87988922

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ity2 11 58617204 to 87804412 29187208 QTL immunity to S. typhimurium 2
Mpo 11 87793784 to 87804412 10628 + protein coding gene myeloperoxidase
Gm11505 11 87795784 to 87801144 5360 - antisense lncRNA gene predicted gene 11505
Tssr104006 11 87799889 to 87799900 11 + TSS region transcription start site region 104006
Tssr3634 11 87799906 to 87799921 15 - TSS region transcription start site region 3634
Tssr104007 11 87799972 to 87799984 12 + TSS region transcription start site region 104007
Sle13 11 87800372 to 87800540 168 QTL systematic lupus erythematosus susceptibility 13
Pcyts3 11 87800372 to 87800540 168 QTL plasmacytoma susceptibility 3
D11Mit39 11 87800372 to 87800540 168 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 39
Nilac2 11 87800372 to 87800540 168 QTL nicotine induced locomotor activity 2
Rafar 11 87800372 to 87800540 168 QTL retinoic acid induced forelimb autopod reduction
Tssr3635 11 87801017 to 87801023 6 + TSS region transcription start site region 3635
Tssr104008 11 87801041 to 87801051 10 + TSS region transcription start site region 104008
Tssr109981 11 87801092 to 87801109 17 - TSS region transcription start site region 109981
Tssr104009 11 87801216 to 87801262 46 + TSS region transcription start site region 104009
Cpgi3501 11 87802523 to 87802845 322 CpG island CpG island 3501
Lpo 11 87806428 to 87826119 19691 - protein coding gene lactoperoxidase
Tssr109982 11 87814322 to 87814335 13 - TSS region transcription start site region 109982
Cpgi3502 11 87817037 to 87817528 491 CpG island CpG island 3502
Tssr109983 11 87825772 to 87825789 17 - TSS region transcription start site region 109983
Tssr109984 11 87825938 to 87825941 3 - TSS region transcription start site region 109984
Tssr109985 11 87826023 to 87826039 16 - TSS region transcription start site region 109985
Tssr109986 11 87828309 to 87828324 15 - TSS region transcription start site region 109986
Tssr109987 11 87828335 to 87828348 13 - TSS region transcription start site region 109987
Cpgi3503 11 87852975 to 87853638 663 CpG island CpG island 3503
Tssr104010 11 87853207 to 87853249 42 + TSS region transcription start site region 104010
Mks1 11 87853215 to 87863803 10588 + protein coding gene Meckel syndrome, type 1
Epx 11 87864000 to 87875536 11536 - protein coding gene eosinophil peroxidase
Cpgi3504 11 87868501 to 87868741 240 CpG island CpG island 3504
Tssr109988 11 87875524 to 87875534 10 - TSS region transcription start site region 109988
Olfr462 11 87888959 to 87889894 935 - protein coding gene olfactory receptor 462
D11Mit341 11 87892609 to 87892706 97 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-341
Olfr463 11 87892987 to 87893922 935 - protein coding gene olfactory receptor 463
Olfr464 11 87913920 to 87915003 1083 - protein coding gene olfactory receptor 464
Gm46263 11 87917724 to 87919056 1332 - lncRNA gene predicted gene, 46263
Tssr3636 11 87931946 to 87931950 4 + TSS region transcription start site region 3636
Gm11504 11 87931987 to 87932159 172 + pseudogene predicted gene 11504
Gm11507 11 87944403 to 87944814 411 + pseudogene predicted gene 11507
Dynll2 11 87979525 to 87987533 8008 - protein coding gene dynein light chain LC8-type 2
Tssr109989 11 87979755 to 87979773 18 - TSS region transcription start site region 109989
Tssr109990 11 87980434 to 87980445 11 - TSS region transcription start site region 109990
Tssr109991 11 87980470 to 87980492 22 - TSS region transcription start site region 109991
Tssr109992 11 87980940 to 87980957 17 - TSS region transcription start site region 109992
Tssr109993 11 87984276 to 87984279 3 - TSS region transcription start site region 109993
Tssr104011 11 87986634 to 87986638 4 + TSS region transcription start site region 104011
Cpgi3505 11 87986641 to 87987930 1289 CpG island CpG island 3505
Tssr109994 11 87987476 to 87987487 11 - TSS region transcription start site region 109994
Tssr109995 11 87987495 to 87987512 17 - TSS region transcription start site region 109995
Tssr109996 11 87987528 to 87987537 9 - TSS region transcription start site region 109996
Motr1 11 103383289 to 87800372 -15582917 QTL modifier of tubby retinal degeneration 1