Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87754471-87794472

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr103966 11 87754860 to 87754871 11 + TSS region transcription start site region 103966
Tssr103967 11 87755567 to 87755588 21 + TSS region transcription start site region 103967
Mir142hg 11 87755577 to 87757270 1693 + lincRNA gene Mir142 host gene (non-protein coding)
Tssr103968 11 87755889 to 87755901 12 + TSS region transcription start site region 103968
Tssr103969 11 87756631 to 87756635 4 + TSS region transcription start site region 103969
Tssr103970 11 87756789 to 87756826 37 + TSS region transcription start site region 103970
Cpgi3497 11 87756804 to 87757353 549 CpG island CpG island 3497
Mir142b 11 87756841 to 87756955 114 - miRNA gene microRNA 142b
Mir142 11 87756864 to 87756927 63 + miRNA gene microRNA 142
Tssr103971 11 87756925 to 87756929 4 + TSS region transcription start site region 103971
Tssr109975 11 87757265 to 87757269 4 - TSS region transcription start site region 109975
Tssr103972 11 87760533 to 87760551 18 + TSS region transcription start site region 103972
Tspoap1 11 87760541 to 87785928 25387 + protein coding gene TSPO associated protein 1
Cpgi3498 11 87760702 to 87760864 162 CpG island CpG island 3498
Tssr103973 11 87760898 to 87760903 5 + TSS region transcription start site region 103973
Tssr103974 11 87761062 to 87761067 5 + TSS region transcription start site region 103974
Tssr103975 11 87762048 to 87762069 21 + TSS region transcription start site region 103975
Cpgi3499 11 87763490 to 87765066 1576 CpG island CpG island 3499
Tssr103976 11 87764702 to 87764732 30 + TSS region transcription start site region 103976
Tssr103977 11 87774471 to 87774472 1 + TSS region transcription start site region 103977
Cpgi3500 11 87778119 to 87779165 1046 CpG island CpG island 3500
Gm34064 11 87783349 to 87795187 11838 - lncRNA gene predicted gene, 34064
Tssr103978 11 87793406 to 87793415 9 + TSS region transcription start site region 103978
Tssr103979 11 87793432 to 87793445 13 + TSS region transcription start site region 103979
Tssr103980 11 87793470 to 87793483 13 + TSS region transcription start site region 103980
Tssr103981 11 87793722 to 87793805 83 + TSS region transcription start site region 103981
Del(11Mpo-Chad)18Brd 11 87793784 to 94569127 6775343 cytogenetic marker deletion, Chr 11, Bradley 18
Dp(11Mpo-Chad)18Brd 11 87793784 to 94569127 6775343 chromosomal duplication duplication, Chr 11, Bradley 18
Mpo 11 87793784 to 87804412 10628 + protein coding gene myeloperoxidase
Tssr103982 11 87793809 to 87793828 19 + TSS region transcription start site region 103982
Tssr103983 11 87793831 to 87793847 16 + TSS region transcription start site region 103983
Tssr103984 11 87794019 to 87794032 13 + TSS region transcription start site region 103984
Tssr103985 11 87794043 to 87794057 14 + TSS region transcription start site region 103985
Tssr103986 11 87794059 to 87794071 12 + TSS region transcription start site region 103986
Tssr103987 11 87794206 to 87794212 6 + TSS region transcription start site region 103987