Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87216906-87368994

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim37 11 87127077 to 87220683 93606 + protein coding gene tripartite motif-containing 37
Tssr103919 11 87216951 to 87216958 7 + TSS region transcription start site region 103919
Tssr109951 11 87217714 to 87217758 44 - TSS region transcription start site region 109951
Ppm1e 11 87226906 to 87358994 132088 - protein coding gene protein phosphatase 1E (PP2C domain containing)
Tssr109952 11 87281196 to 87281200 4 - TSS region transcription start site region 109952
Tssr109953 11 87293912 to 87293937 25 - TSS region transcription start site region 109953
Tssr109954 11 87294047 to 87294061 14 - TSS region transcription start site region 109954
Gm11490 11 87304673 to 87304944 271 + pseudogene predicted gene 11490
Gm22883 11 87318694 to 87318799 105 - snRNA gene predicted gene, 22883
Tssr109955 11 87320400 to 87320404 4 - TSS region transcription start site region 109955
Tssr109956 11 87325061 to 87325073 12 - TSS region transcription start site region 109956
Tssr103920 11 87331612 to 87331631 19 + TSS region transcription start site region 103920
Tssr103921 11 87331640 to 87331647 7 + TSS region transcription start site region 103921
5830426K05Rik 11 87340723 to 87343849 3126 unclassified gene RIKEN cDNA 5830426K05 gene
Tssr109957 11 87342873 to 87342881 8 - TSS region transcription start site region 109957
Gm33937 11 87357523 to 87361744 4221 + lncRNA gene predicted gene, 33937
Cpgi3485 11 87358030 to 87359344 1314 CpG island CpG island 3485
Tssr109958 11 87358907 to 87358944 37 - TSS region transcription start site region 109958
Tssr109959 11 87359011 to 87359081 70 - TSS region transcription start site region 109959
Tssr109960 11 87359086 to 87359093 7 - TSS region transcription start site region 109960