MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:86757624-86857645

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cltc	11	86694610 to 86757742	63132	-	protein coding gene	clathrin, heavy polypeptide (Hc)
Cpgi3477	11	86756846 to 86758311	1465		CpG island	CpG island 3477
Gm42085	11	86757794 to 86775647	17853	+	lncRNA gene	predicted gene, 42085
Tssr3625	11	86757836 to 86757876	40	+	TSS region	transcription start site region 3625
Tssr103897	11	86757879 to 86757911	32	+	TSS region	transcription start site region 103897
Tssr103898	11	86757917 to 86757928	11	+	TSS region	transcription start site region 103898
Tssr3626	11	86758164 to 86758189	25	+	TSS region	transcription start site region 3626
Tssr103899	11	86758228 to 86758232	4	+	TSS region	transcription start site region 103899
Dhx40	11	86768846 to 86807746	38900	-	protein coding gene	DEAH (Asp-Glu-Ala-His) box polypeptide 40
Tssr109922	11	86805271 to 86805275	4	-	TSS region	transcription start site region 109922
Cpgi3478	11	86807119 to 86807966	847		CpG island	CpG island 3478
Tssr109923	11	86807541 to 86807553	12	-	TSS region	transcription start site region 109923
Tssr109924	11	86807565 to 86807622	57	-	TSS region	transcription start site region 109924
Tssr109925	11	86807624 to 86807645	21	-	TSS region	transcription start site region 109925
Tssr3627	11	86807658 to 86807661	3	-	TSS region	transcription start site region 3627
Gm33742	11	86818625 to 86867595	48970	-	lncRNA gene	predicted gene, 33742
Tssr109926	11	86828460 to 86828471	11	-	TSS region	transcription start site region 109926
Tssr109927	11	86838722 to 86838726	4	-	TSS region	transcription start site region 109927