Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83650645-83830659

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Dcr14 11 83650643 to 83650798 155 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 14
Tssr103732 11 83656075 to 83656089 14 + TSS region transcription start site region 103732
Tssr109731 11 83657417 to 83657426 9 - TSS region transcription start site region 109731
Tssr103733 11 83662534 to 83662544 10 + TSS region transcription start site region 103733
Tssr103734 11 83662556 to 83662559 3 + TSS region transcription start site region 103734
Tssr103735 11 83662579 to 83662594 15 + TSS region transcription start site region 103735
Ccl4 11 83662584 to 83664683 2099 + protein coding gene chemokine (C-C motif) ligand 4
Tssr103736 11 83663445 to 83663473 28 + TSS region transcription start site region 103736
Tssr103737 11 83663474 to 83663477 3 + TSS region transcription start site region 103737
Tssr103738 11 83663480 to 83663500 20 + TSS region transcription start site region 103738
Tssr103739 11 83663571 to 83663579 8 + TSS region transcription start site region 103739
Tssr103740 11 83664305 to 83664339 34 + TSS region transcription start site region 103740
Tssr103741 11 83664388 to 83664483 95 + TSS region transcription start site region 103741
Tssr103742 11 83664485 to 83664513 28 + TSS region transcription start site region 103742
Tssr103743 11 83664565 to 83664577 12 + TSS region transcription start site region 103743
Tssr103744 11 83664599 to 83664612 13 + TSS region transcription start site region 103744
Tssr103745 11 83677507 to 83677511 4 + TSS region transcription start site region 103745
Gm11433 11 83677518 to 83678345 827 + pseudogene predicted gene 11433
Atp5k-ps3 11 83681538 to 83681671 133 - pseudogene ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E, pseudogene 3
Gm11438 11 83681538 to 83681726 188 - pseudogene predicted gene 11438
D11Bhm145 11 83685093 to 83685177 84 DNA segment DNA segment, Chr 11, Boehm 145
Gm11432 11 83687610 to 83688456 846 + pseudogene predicted gene 11432
Tssr103746 11 83695264 to 83695268 4 + TSS region transcription start site region 103746
Gm11430 11 83695275 to 83696185 910 + pseudogene predicted gene 11430
Gm11429 11 83701291 to 83701434 143 + pseudogene predicted gene 11429
Tssr103747 11 83704053 to 83704090 37 + TSS region transcription start site region 103747
Wfdc17 11 83704056 to 83706269 2213 + protein coding gene WAP four-disulfide core domain 17
D11Mit119 11 83707624 to 83707776 152 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 119
Wfdc18 11 83709015 to 83711348 2333 + protein coding gene WAP four-disulfide core domain 18
Tssr103748 11 83709093 to 83709096 3 + TSS region transcription start site region 103748
Tssr103749 11 83709101 to 83709116 15 + TSS region transcription start site region 103749
Tssr103750 11 83711224 to 83711232 8 + TSS region transcription start site region 103750
Tssr103751 11 83711236 to 83711246 10 + TSS region transcription start site region 103751
Tssr103752 11 83731343 to 83731348 5 + TSS region transcription start site region 103752
Tssr109732 11 83737307 to 83737319 12 - TSS region transcription start site region 109732
Tssr103753 11 83740645 to 83740659 14 + TSS region transcription start site region 103753
Tssr103754 11 83740674 to 83740677 3 + TSS region transcription start site region 103754
Tssr103755 11 83740706 to 83740741 35 + TSS region transcription start site region 103755
Tssr103756 11 83740747 to 83740764 17 + TSS region transcription start site region 103756
Tssr3614 11 83743823 to 83743845 22 + TSS region transcription start site region 3614
1700018H16Rik 11 83744430 to 83744866 436 unclassified gene RIKEN cDNA 1700018H16 gene
Tssr103757 11 83746366 to 83746386 20 + TSS region transcription start site region 103757
Wfdc21 11 83746940 to 83752642 5702 + protein coding gene WAP four-disulfide core domain 21
Tssr103758 11 83746989 to 83747006 17 + TSS region transcription start site region 103758
Tssr103759 11 83748276 to 83748318 42 + TSS region transcription start site region 103759
Cpgi3419 11 83753449 to 83754317 868 CpG island CpG island 3419
Tssr109733 11 83753633 to 83753653 20 - TSS region transcription start site region 109733
Tssr103760 11 83753689 to 83753722 33 + TSS region transcription start site region 103760
Heatr6 11 83753696 to 83783754 30058 + protein coding gene HEAT repeat containing 6
Gm22311 11 83764638 to 83764747 109 - rRNA gene predicted gene, 22311
Tssr103761 11 83771975 to 83771979 4 + TSS region transcription start site region 103761
Tssr3615 11 83789532 to 83789565 33 + TSS region transcription start site region 3615
Gm11434 11 83800464 to 83801089 625 + pseudogene predicted gene 11434
Gm38934 11 83804271 to 83811040 6769 - lncRNA gene predicted gene, 38934
Gm12576 11 83817682 to 83849493 31811 - lincRNA gene predicted gene 12576