Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83534589-83614600

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mol4 11 36391750 to 83590530 47198780 QTL modifier of LPS-response 4
Gm32650 11 83511305 to 83546540 35235 + lncRNA gene predicted gene, 32650
Tssr103713 11 83535083 to 83535109 26 + TSS region transcription start site region 103713
Ccl16-ps 11 83565644 to 83569128 3484 - pseudogene chemokine (C-C motif) ligand 16, pseudogene
Ccl9 11 83572919 to 83578636 5717 - protein coding gene chemokine (C-C motif) ligand 9
Tssr109677 11 83573673 to 83573684 11 - TSS region transcription start site region 109677
Tssr109678 11 83574049 to 83574065 16 - TSS region transcription start site region 109678
Tssr109679 11 83574327 to 83574349 22 - TSS region transcription start site region 109679
Tssr109680 11 83574589 to 83574600 11 - TSS region transcription start site region 109680
Tssr103714 11 83574647 to 83574680 33 + TSS region transcription start site region 103714
Tssr103715 11 83574688 to 83574730 42 + TSS region transcription start site region 103715
Tssr109681 11 83574711 to 83574719 8 - TSS region transcription start site region 109681
Tssr109682 11 83574980 to 83574994 14 - TSS region transcription start site region 109682
Tssr109683 11 83575031 to 83575042 11 - TSS region transcription start site region 109683
Tssr109684 11 83575057 to 83575068 11 - TSS region transcription start site region 109684
Tssr109685 11 83575102 to 83575109 7 - TSS region transcription start site region 109685
Tssr109686 11 83575165 to 83575178 13 - TSS region transcription start site region 109686
Tssr109687 11 83575214 to 83575232 18 - TSS region transcription start site region 109687
Tssr109688 11 83575261 to 83575273 12 - TSS region transcription start site region 109688
Tssr109689 11 83575304 to 83575315 11 - TSS region transcription start site region 109689
Tssr109690 11 83575317 to 83575324 7 - TSS region transcription start site region 109690
Tssr109691 11 83575327 to 83575338 11 - TSS region transcription start site region 109691
Tssr103716 11 83575350 to 83575366 16 + TSS region transcription start site region 103716
Tssr109692 11 83575358 to 83575366 8 - TSS region transcription start site region 109692
Tssr109693 11 83575469 to 83575483 14 - TSS region transcription start site region 109693
Tssr109694 11 83575863 to 83575910 47 - TSS region transcription start site region 109694
Tssr109695 11 83575913 to 83575958 45 - TSS region transcription start site region 109695
Tssr109696 11 83576947 to 83576954 7 - TSS region transcription start site region 109696
Tssr109697 11 83577137 to 83577147 10 - TSS region transcription start site region 109697
Tssr109698 11 83578420 to 83578428 8 - TSS region transcription start site region 109698
Tssr109699 11 83578467 to 83578477 10 - TSS region transcription start site region 109699
Tssr109700 11 83578496 to 83578508 12 - TSS region transcription start site region 109700
Tssr109701 11 83578529 to 83578534 5 - TSS region transcription start site region 109701
Tssr109702 11 83578586 to 83578595 9 - TSS region transcription start site region 109702
Tssr109703 11 83578596 to 83578619 23 - TSS region transcription start site region 109703
Tssr109704 11 83578620 to 83578641 21 - TSS region transcription start site region 109704
E230016K23Rik 11 83582061 to 83623693 41632 + lncRNA gene RIKEN cDNA E230016K23 gene
Tssr103717 11 83582073 to 83582090 17 + TSS region transcription start site region 103717
Ccl6 11 83587886 to 83593087 5201 - protein coding gene chemokine (C-C motif) ligand 6
Tssr109705 11 83588156 to 83588167 11 - TSS region transcription start site region 109705
Tssr109706 11 83588275 to 83588293 18 - TSS region transcription start site region 109706
Tssr103718 11 83588387 to 83588402 15 + TSS region transcription start site region 103718
Tssr109707 11 83588608 to 83588611 3 - TSS region transcription start site region 109707
Tssr109708 11 83588709 to 83588712 3 - TSS region transcription start site region 109708
Tssr109709 11 83588780 to 83588824 44 - TSS region transcription start site region 109709
Tssr109710 11 83588915 to 83588928 13 - TSS region transcription start site region 109710
D11Pas18 11 83589312 to 83589790 478 DNA segment DNA segment, Chr 11, Pasteur Institute 18
Tssr109711 11 83589341 to 83589418 77 - TSS region transcription start site region 109711
Tssr109712 11 83589775 to 83589803 28 - TSS region transcription start site region 109712
D11Mit120 11 83590409 to 83590530 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 120
Tssr109713 11 83590627 to 83590643 16 - TSS region transcription start site region 109713
Tssr109714 11 83592552 to 83592570 18 - TSS region transcription start site region 109714
Tssr109715 11 83592981 to 83592999 18 - TSS region transcription start site region 109715
Gm38933 11 83594426 to 83604745 10319 - lncRNA gene predicted gene, 38933
D11Mit97 11 83603304 to 83603565 261 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 97
Tssr3610 11 83603702 to 83603732 30 + TSS region transcription start site region 3610
Tssr109716 11 83604693 to 83604702 9 - TSS region transcription start site region 109716
Tssr109717 11 83604719 to 83604760 41 - TSS region transcription start site region 109717
Tssr3611 11 83604829 to 83604836 7 - TSS region transcription start site region 3611
Tssr3612 11 83604966 to 83604976 10 + TSS region transcription start site region 3612
Tssr3613 11 83605613 to 83605649 36 - TSS region transcription start site region 3613