Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82891025-82961211

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr103586 11 82892116 to 82892128 12 + TSS region transcription start site region 103586
Tssr3604 11 82892129 to 82892135 6 + TSS region transcription start site region 3604
Fndc8 11 82892145 to 82900737 8592 + protein coding gene fibronectin type III domain containing 8
Nle1 11 82900768 to 82908411 7643 - protein coding gene notchless homolog 1
Cpgi3402 11 82907614 to 82908625 1011 CpG island CpG island 3402
Tssr109594 11 82908230 to 82908249 19 - TSS region transcription start site region 109594
Tssr109595 11 82908360 to 82908400 40 - TSS region transcription start site region 109595
Tssr109596 11 82910783 to 82910803 20 - TSS region transcription start site region 109596
Unc45b 11 82911253 to 82943406 32153 + protein coding gene unc-45 myosin chaperone B
Tssr103587 11 82911279 to 82911294 15 + TSS region transcription start site region 103587
Tssr103588 11 82911309 to 82911331 22 + TSS region transcription start site region 103588
Unc45bos 11 82924903 to 82933382 8479 - lncRNA gene unc-45 myosin chaperone B, opposite strand
Cpgi3403 11 82926025 to 82926211 186 CpG island CpG island 3403
D11Pas77 11 82928659 to 82928749 90 DNA segment DNA segment, Chr 11, Pasteur Institute 77
Cpgi3404 11 82929993 to 82932223 2230 CpG island CpG island 3404
Cpgi3405 11 82932478 to 82933782 1304 CpG island CpG island 3405
Tssr103589 11 82933484 to 82933488 4 + TSS region transcription start site region 103589
D11Pas71 11 82939605 to 82939758 153 DNA segment DNA segment, Chr 11, Pasteur Institute 71
Slfn5os 11 82942341 to 82960681 18340 - antisense lncRNA gene schlafen 5, opposite strand
Tssr103590 11 82951346 to 82951360 14 + TSS region transcription start site region 103590
Slfn5 11 82951349 to 82964840 13491 + protein coding gene schlafen 5
Tssr103591 11 82951366 to 82951393 27 + TSS region transcription start site region 103591
Tssr103592 11 82951406 to 82951448 42 + TSS region transcription start site region 103592
Cpgi3406 11 82952050 to 82952216 166 CpG island CpG island 3406
Tssr103593 11 82952062 to 82952094 32 + TSS region transcription start site region 103593
Tssr103594 11 82952095 to 82952125 30 + TSS region transcription start site region 103594
Tssr103595 11 82954556 to 82954575 19 + TSS region transcription start site region 103595
Tssr103596 11 82956593 to 82956604 11 + TSS region transcription start site region 103596
Tssr103597 11 82956894 to 82956905 11 + TSS region transcription start site region 103597
Tssr103598 11 82956945 to 82956959 14 + TSS region transcription start site region 103598
Tssr109597 11 82960648 to 82960671 23 - TSS region transcription start site region 109597
Tssr109598 11 82960673 to 82960683 10 - TSS region transcription start site region 109598
Tssr109599 11 82960693 to 82960698 5 - TSS region transcription start site region 109599
Tssr103599 11 82960895 to 82960906 11 + TSS region transcription start site region 103599