MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:82772539-82842542

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11423	11	82779601 to 82781042	1441	-	antisense lncRNA gene	predicted gene 11423
Cpgi3399	11	82780888 to 82781895	1007		CpG island	CpG island 3399
Tssr109578	11	82781039 to 82781082	43	-	TSS region	transcription start site region 109578
Lig3	11	82781109 to 82804274	23165	+	protein coding gene	ligase III, DNA, ATP-dependent
Tssr103579	11	82781144 to 82781224	80	+	TSS region	transcription start site region 103579
Tssr103580	11	82781230 to 82781255	25	+	TSS region	transcription start site region 103580
Tssr103581	11	82783331 to 82783342	11	+	TSS region	transcription start site region 103581
Tssr103582	11	82785370 to 82785378	8	+	TSS region	transcription start site region 103582
Rffl	11	82803819 to 82871238	67419	-	protein coding gene	ring finger and FYVE like domain containing protein
Tssr109579	11	82804423 to 82804428	5	-	TSS region	transcription start site region 109579
Tssr109580	11	82807539 to 82807542	3	-	TSS region	transcription start site region 109580
Tssr103583	11	82827760 to 82827766	6	+	TSS region	transcription start site region 103583
Tssr109581	11	82829024 to 82829042	18	-	TSS region	transcription start site region 109581
D11Pas73	11	82829080 to 82829190	110		DNA segment	DNA segment, Chr 11, Pasteur Institute 73
Tssr103584	11	82829121 to 82829168	47	+	TSS region	transcription start site region 103584
29.MMHAP71FLB5.seq	11	82831021 to 82831178	157		DNA segment	DNA segment, 29.MMHAP71FLB5.seq
D11Pas70	11	82832450 to 82832600	150		DNA segment	DNA segment, Chr 11, Pasteur Institute 70