Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:80873905-81622614

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asic2 11 80880163 to 81968396 1088233 - protein coding gene acid-sensing (proton-gated) ion channel 2
Tssr3602 11 80978031 to 80978034 3 + TSS region transcription start site region 3602
Gm11416 11 81048115 to 81048768 653 + pseudogene predicted gene 11416
Gm11417 11 81072403 to 81083358 10955 + antisense lncRNA gene predicted gene 11417
Tssr109554 11 81075752 to 81075753 1 - TSS region transcription start site region 109554
Cpgi3391 11 81151588 to 81154151 2563 CpG island CpG island 3391
Tssr109555 11 81153603 to 81153642 39 - TSS region transcription start site region 109555
Tssr109556 11 81153645 to 81153662 17 - TSS region transcription start site region 109556
Tssr109557 11 81153705 to 81153719 14 - TSS region transcription start site region 109557
Gm42084 11 81243905 to 81252614 8709 - lncRNA gene predicted gene, 42084
D11Mit319 11 81261692 to 81261796 104 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 319
4930527B05Rik 11 81385013 to 81402491 17478 + antisense lncRNA gene RIKEN cDNA 4930527B05 gene
Cpgi3392 11 81572630 to 81573186 556 CpG island CpG island 3392
1700071K01Rik 11 81572655 to 81573473 818 - pseudogene RIKEN cDNA 1700071K01 gene
Cpgi3393 11 81573450 to 81573651 201 CpG island CpG island 3393
Tssr109558 11 81573516 to 81573542 26 - TSS region transcription start site region 109558
Tssr103556 11 81587353 to 81587364 11 + TSS region transcription start site region 103556
Gm11418 11 81587361 to 81593478 6117 + antisense lncRNA gene predicted gene 11418
Tssr109559 11 81593114 to 81593118 4 - TSS region transcription start site region 109559