Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:80096678-80182175

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atad5 11 80089400 to 80135794 46394 + protein coding gene ATPase family, AAA domain containing 5
Tssr103480 11 80136352 to 80136365 13 + TSS region transcription start site region 103480
Tssr103481 11 80136575 to 80136584 9 + TSS region transcription start site region 103481
Tefm 11 80136678 to 80142175 5497 - protein coding gene transcription elongation factor, mitochondrial
Tssr103482 11 80137953 to 80137983 30 + TSS region transcription start site region 103482
Tssr109536 11 80139942 to 80139969 27 - TSS region transcription start site region 109536
Cpgi3377 11 80141799 to 80142318 519 CpG island CpG island 3377
Tssr103483 11 80141811 to 80141855 44 + TSS region transcription start site region 103483
Tssr109537 11 80142099 to 80142112 13 - TSS region transcription start site region 109537
Tssr109538 11 80142123 to 80142162 39 - TSS region transcription start site region 109538
Tssr109539 11 80142164 to 80142177 13 - TSS region transcription start site region 109539
Tssr109540 11 80142998 to 80143013 15 - TSS region transcription start site region 109540
Cpgi3378 11 80153864 to 80154906 1042 CpG island CpG island 3378
Tssr103484 11 80154071 to 80154082 11 + TSS region transcription start site region 103484
Tssr103485 11 80154083 to 80154090 7 + TSS region transcription start site region 103485
Tssr103486 11 80154103 to 80154137 34 + TSS region transcription start site region 103486
Adap2 11 80154105 to 80178958 24853 + protein coding gene ArfGAP with dual PH domains 2
Tssr103487 11 80154555 to 80154569 14 + TSS region transcription start site region 103487
Tssr103488 11 80154596 to 80154616 20 + TSS region transcription start site region 103488
Adap2os 11 80158861 to 80177629 18768 - antisense lncRNA gene ArfGAP with dual PH domains 2, opposite strand
Tssr103489 11 80161340 to 80161353 13 + TSS region transcription start site region 103489
Tssr103490 11 80165670 to 80165679 9 + TSS region transcription start site region 103490
Tssr103491 11 80171483 to 80171488 5 + TSS region transcription start site region 103491
Tssr103492 11 80173403 to 80173423 20 + TSS region transcription start site region 103492
Tssr103493 11 80177312 to 80177319 7 + TSS region transcription start site region 103493
Tssr103494 11 80177377 to 80177381 4 + TSS region transcription start site region 103494
Tssr103495 11 80177444 to 80177448 4 + TSS region transcription start site region 103495
Tssr3598 11 80177467 to 80177491 24 + TSS region transcription start site region 3598
Tssr103496 11 80177932 to 80177943 11 + TSS region transcription start site region 103496
Tssr103497 11 80177967 to 80177993 26 + TSS region transcription start site region 103497
Tssr103498 11 80178020 to 80178045 25 + TSS region transcription start site region 103498
Tssr103499 11 80178196 to 80178227 31 + TSS region transcription start site region 103499
Tssr103500 11 80178273 to 80178284 11 + TSS region transcription start site region 103500
Tssr103501 11 80178550 to 80178567 17 + TSS region transcription start site region 103501
Tssr103502 11 80178656 to 80178665 9 + TSS region transcription start site region 103502
Tssr103503 11 80178709 to 80178724 15 + TSS region transcription start site region 103503
Tssr103504 11 80178755 to 80178761 6 + TSS region transcription start site region 103504
Tssr103505 11 80178851 to 80178858 7 + TSS region transcription start site region 103505
Tssr103506 11 80179158 to 80179174 16 + TSS region transcription start site region 103506
Tssr103507 11 80179322 to 80179335 13 + TSS region transcription start site region 103507
Tssr103508 11 80179353 to 80179368 15 + TSS region transcription start site region 103508
D11Bhm113 11 80180987 to 80181073 86 DNA segment DNA segment, Chr 11, Boehm 113