Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78328411-78389017

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3342 11 78328156 to 78329004 848 CpG island CpG island 3342
Pigs 11 78328422 to 78342776 14354 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class S
Tssr103284 11 78328425 to 78328472 47 + TSS region transcription start site region 103284
D11Bhm51 11 78336516 to 78336634 118 DNA segment DNA segment, Chr 11, Boehm 51
Tssr103285 11 78337811 to 78337829 18 + TSS region transcription start site region 103285
Tssr103286 11 78341837 to 78341886 49 + TSS region transcription start site region 103286
Cpgi3343 11 78343334 to 78344306 972 CpG island CpG island 3343
Tssr103287 11 78343437 to 78343444 7 + TSS region transcription start site region 103287
Tssr103288 11 78343475 to 78343526 51 + TSS region transcription start site region 103288
Unc119 11 78343495 to 78349164 5669 + protein coding gene unc-119 lipid binding chaperone
Tssr103289 11 78343530 to 78343541 11 + TSS region transcription start site region 103289
Tssr103290 11 78344533 to 78344536 3 + TSS region transcription start site region 103290
D11Seg21 11 78344963 to 78345095 132 DNA segment DNA segment, Chr 11, Segre 21
Tssr103291 11 78346683 to 78346709 26 + TSS region transcription start site region 103291
Tssr103292 11 78348170 to 78348200 30 + TSS region transcription start site region 103292
D11Bhm52 11 78353355 to 78353636 281 DNA segment DNA segment, Chr 11, Boehm 52
Foxn1 11 78357577 to 78386558 28981 - protein coding gene forkhead box N1
D11Seg20 11 78357760 to 78357929 169 DNA segment DNA segment, Chr 11, Segre 20
Cpgi3344 11 78358411 to 78359017 606 CpG island CpG island 3344
Tssr103293 11 78360730 to 78360777 47 + TSS region transcription start site region 103293
D11Seg19 11 78361473 to 78361608 135 DNA segment DNA segment, Chr 11, Segre 19
Gm30367 11 78372883 to 78376582 3699 + lncRNA gene predicted gene, 30367
Tssr109390 11 78379034 to 78379040 6 - TSS region transcription start site region 109390
D11Seg23 11 78384240 to 78384551 311 DNA segment DNA segment, Chr 11, Segre 23
Tssr109391 11 78386394 to 78386413 19 - TSS region transcription start site region 109391
Tssr109392 11 78386569 to 78386598 29 - TSS region transcription start site region 109392
Tssr109393 11 78386693 to 78386709 16 - TSS region transcription start site region 109393