MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:78201749-78250738

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Proca1	11	78193392 to 78205763	12371	+	protein coding gene	protein interacting with cyclin A1
D11Seg9	11	78205045 to 78205173	128		DNA segment	DNA segment, Chr 11, Segre 9
Supt6	11	78206749 to 78245738	38989	-	protein coding gene	suppressor of Ty 6
Tssr109382	11	78232064 to 78232079	15	-	TSS region	transcription start site region 109382
D11Seg11	11	78232463 to 78232602	139		DNA segment	DNA segment, Chr 11, Segre 11
Tssr109383	11	78233581 to 78233599	18	-	TSS region	transcription start site region 109383
Tssr103251	11	78244517 to 78244549	32	+	TSS region	transcription start site region 103251
Tssr103252	11	78245093 to 78245115	22	+	TSS region	transcription start site region 103252
Cpgi3339	11	78245332 to 78246293	961		CpG island	CpG island 3339
Tssr103253	11	78245510 to 78245519	9	+	TSS region	transcription start site region 103253
Tssr109384	11	78245674 to 78245716	42	-	TSS region	transcription start site region 109384
Tssr103254	11	78245743 to 78245821	78	+	TSS region	transcription start site region 103254
Sdf2	11	78245746 to 78255496	9750	+	protein coding gene	stromal cell derived factor 2
Tssr109385	11	78245942 to 78245977	35	-	TSS region	transcription start site region 109385
Tssr103255	11	78245983 to 78246011	28	+	TSS region	transcription start site region 103255
Tssr109386	11	78246168 to 78246251	83	-	TSS region	transcription start site region 109386
D11Seg12	11	78247901 to 78248123	222		DNA segment	DNA segment, Chr 11, Segre 12
Gm18686	11	78249949 to 78250560	611	-	pseudogene	predicted gene, 18686