Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75151333-75191502

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smg6 11 74925872 to 75164448 238576 + protein coding gene Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
Hic1 11 75164565 to 75169519 4954 - protein coding gene hypermethylated in cancer 1
Cpgi3251 11 75165061 to 75169413 4352 CpG island CpG island 3251
Tssr109159 11 75168152 to 75168156 4 - TSS region transcription start site region 109159
Tssr109160 11 75169137 to 75169151 14 - TSS region transcription start site region 109160
Tssr109161 11 75169167 to 75169176 9 - TSS region transcription start site region 109161
Cpgi3252 11 75170119 to 75170923 804 CpG island CpG island 3252
Cpgi3253 11 75171333 to 75171502 169 CpG island CpG island 3253
Cpgi3254 11 75172076 to 75174051 1975 CpG island CpG island 3254
Tssr102928 11 75172444 to 75172455 11 + TSS region transcription start site region 102928
Tssr102929 11 75172471 to 75172478 7 + TSS region transcription start site region 102929
Tssr102930 11 75172553 to 75172569 16 + TSS region transcription start site region 102930
1700016P03Rik 11 75172560 to 75177633 5073 + unclassified non-coding RNA gene RIKEN cDNA 1700016P03 gene
Mir212 11 75173388 to 75173478 90 + miRNA gene microRNA 212
Mirc19 11 75173388 to 75173747 359 complex/cluster/region microRNA cluster 19, including Mir212 through Mir132
Mir132 11 75173682 to 75173747 65 + miRNA gene microRNA 132
Ovca2 11 75175943 to 75178808 2865 - protein coding gene candidate tumor suppressor in ovarian cancer 2
Dph1 11 75177643 to 75190483 12840 - protein coding gene diphthamide biosynthesis 1
Cpgi3255 11 75178452 to 75179229 777 CpG island CpG island 3255
Tssr109162 11 75178792 to 75178830 38 - TSS region transcription start site region 109162
Cpgi3256 11 75190113 to 75190737 624 CpG island CpG island 3256
Tssr109163 11 75190458 to 75190488 30 - TSS region transcription start site region 109163