Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70225702-70465723

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128 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcl6b 11 70224128 to 70229798 5670 - protein coding gene B cell CLL/lymphoma 6, member B
Cpgi3174 11 70226471 to 70226986 515 CpG island CpG island 3174
Tssr108922 11 70227289 to 70227297 8 - TSS region transcription start site region 108922
Cpgi3175 11 70228929 to 70229619 690 CpG island CpG island 3175
Tssr108923 11 70229755 to 70229761 6 - TSS region transcription start site region 108923
Tssr108924 11 70230216 to 70230241 25 - TSS region transcription start site region 108924
Cpgi3176 11 70230328 to 70230743 415 CpG island CpG island 3176
Mir497b 11 70234692 to 70234816 124 - miRNA gene microRNA 497b
Mir497 11 70234717 to 70234800 83 + miRNA gene microRNA 497
Mirc27 11 70234717 to 70235135 418 complex/cluster/region microRNA cluster 27, including Mir497 through Mir195a
Mir195a 11 70235042 to 70235135 93 + miRNA gene microRNA 195a
Gm21988 11 70235206 to 70239830 4624 - protein coding gene predicted gene 21988
0610010K14Rik 11 70235206 to 70237914 2708 - protein coding gene RIKEN cDNA 0610010K14 gene
Cpgi3177 11 70237283 to 70238530 1247 CpG island CpG island 3177
Tssr108925 11 70237570 to 70237600 30 - TSS region transcription start site region 108925
Tssr108926 11 70237605 to 70237633 28 - TSS region transcription start site region 108926
Tssr108927 11 70237638 to 70237651 13 - TSS region transcription start site region 108927
Tssr108928 11 70237761 to 70237781 20 - TSS region transcription start site region 108928
Tssr108929 11 70237852 to 70237885 33 - TSS region transcription start site region 108929
Tssr108930 11 70237886 to 70237919 33 - TSS region transcription start site region 108930
Tssr102675 11 70238010 to 70238031 21 + TSS region transcription start site region 102675
Rnasek 11 70238124 to 70239842 1718 - protein coding gene ribonuclease, RNase K
Tssr108931 11 70238305 to 70238322 17 - TSS region transcription start site region 108931
Tssr108932 11 70238372 to 70238388 16 - TSS region transcription start site region 108932
Tssr108933 11 70238393 to 70238420 27 - TSS region transcription start site region 108933
Tssr108934 11 70238464 to 70238475 11 - TSS region transcription start site region 108934
Tssr108935 11 70238958 to 70238970 12 - TSS region transcription start site region 108935
Gm40191 11 70239001 to 70269430 30429 + lncRNA gene predicted gene, 40191
Tssr108936 11 70239207 to 70239219 12 - TSS region transcription start site region 108936
Cpgi3178 11 70239505 to 70240102 597 CpG island CpG island 3178
Tssr108937 11 70239707 to 70239712 5 - TSS region transcription start site region 108937
Tssr108938 11 70239766 to 70239772 6 - TSS region transcription start site region 108938
Tssr108939 11 70239794 to 70239860 66 - TSS region transcription start site region 108939
Alox12 11 70241457 to 70255353 13896 - protein coding gene arachidonate 12-lipoxygenase
Cpgi3179 11 70254479 to 70255403 924 CpG island CpG island 3179
Tssr108940 11 70255329 to 70255347 18 - TSS region transcription start site region 108940
Gm32992 11 70280244 to 70285954 5710 + lncRNA gene predicted gene, 32992
Gm33048 11 70287377 to 70288384 1007 + lncRNA gene predicted gene, 33048
Gm40192 11 70290987 to 70294239 3252 + lncRNA gene predicted gene, 40192
Alox12e 11 70315610 to 70322628 7018 - protein coding gene arachidonate lipoxygenase, epidermal
Cpgi3180 11 70321657 to 70322423 766 CpG island CpG island 3180
Tssr108941 11 70322464 to 70322476 12 - TSS region transcription start site region 108941
Tssr108942 11 70322502 to 70322514 12 - TSS region transcription start site region 108942
Tssr108943 11 70322520 to 70322537 17 - TSS region transcription start site region 108943
Alox15 11 70344152 to 70352031 7879 - protein coding gene arachidonate 15-lipoxygenase
Tssr108944 11 70345702 to 70345723 21 - TSS region transcription start site region 108944
Cpgi3181 11 70351844 to 70352003 159 CpG island CpG island 3181
Tssr108945 11 70352029 to 70352032 3 - TSS region transcription start site region 108945
Gm12312 11 70358138 to 70358781 643 + pseudogene predicted gene 12312
Tssr108946 11 70358407 to 70358414 7 - TSS region transcription start site region 108946
Tssr108947 11 70381959 to 70381963 4 - TSS region transcription start site region 108947
Pelp1 11 70392883 to 70410031 17148 - protein coding gene proline, glutamic acid and leucine rich protein 1
Tssr108948 11 70394411 to 70394428 17 - TSS region transcription start site region 108948
Tssr108949 11 70407139 to 70407143 4 - TSS region transcription start site region 108949
Tssr108950 11 70408943 to 70408949 6 - TSS region transcription start site region 108950
Cpgi3182 11 70409479 to 70410493 1014 CpG island CpG island 3182
Tssr108951 11 70410010 to 70410042 32 - TSS region transcription start site region 108951
Gm12313 11 70426553 to 70426973 420 + pseudogene predicted gene 12313
Gm12314 11 70429016 to 70429553 537 - pseudogene predicted gene 12314
Cpgi3183 11 70432087 to 70433142 1055 CpG island CpG island 3183
Tssr102676 11 70432552 to 70432557 5 + TSS region transcription start site region 102676
Tssr102677 11 70432572 to 70432590 18 + TSS region transcription start site region 102677
Tssr102678 11 70432601 to 70432624 23 + TSS region transcription start site region 102678
Tssr102679 11 70432627 to 70432707 80 + TSS region transcription start site region 102679
Arrb2 11 70432635 to 70440828 8193 + protein coding gene arrestin, beta 2
Tssr108952 11 70433297 to 70433333 36 - TSS region transcription start site region 108952
Tssr3568 11 70433968 to 70433982 14 + TSS region transcription start site region 3568
Tssr102680 11 70435706 to 70435717 11 + TSS region transcription start site region 102680
Tssr102681 11 70436149 to 70436170 21 + TSS region transcription start site region 102681
Tssr102682 11 70436175 to 70436193 18 + TSS region transcription start site region 102682
Tssr102683 11 70436311 to 70436348 37 + TSS region transcription start site region 102683
Tssr102684 11 70436655 to 70436694 39 + TSS region transcription start site region 102684
Tssr102685 11 70437252 to 70437259 7 + TSS region transcription start site region 102685
Tssr102686 11 70437281 to 70437311 30 + TSS region transcription start site region 102686
Tssr102687 11 70437315 to 70437326 11 + TSS region transcription start site region 102687
Tssr102688 11 70437613 to 70437658 45 + TSS region transcription start site region 102688
Tssr102689 11 70437668 to 70437679 11 + TSS region transcription start site region 102689
Tssr102690 11 70437928 to 70437949 21 + TSS region transcription start site region 102690
Mir7115 11 70438255 to 70438318 63 + miRNA gene microRNA 7115
Tssr102691 11 70438677 to 70438695 18 + TSS region transcription start site region 102691
Tssr102692 11 70440314 to 70440338 24 + TSS region transcription start site region 102692
Cpgi3184 11 70451767 to 70452424 657 CpG island CpG island 3184
Tssr102693 11 70451905 to 70451950 45 + TSS region transcription start site region 102693
Med11 11 70451931 to 70453727 1796 + protein coding gene mediator complex subunit 11
Tssr102694 11 70451955 to 70451974 19 + TSS region transcription start site region 102694
Tssr102695 11 70452230 to 70452250 20 + TSS region transcription start site region 102695
Cxcl16 11 70454232 to 70459984 5752 - protein coding gene chemokine (C-X-C motif) ligand 16
Tssr108953 11 70454462 to 70454473 11 - TSS region transcription start site region 108953
Tssr108954 11 70454556 to 70454561 5 - TSS region transcription start site region 108954
Tssr102696 11 70455185 to 70455196 11 + TSS region transcription start site region 102696
Tssr108955 11 70455194 to 70455211 17 - TSS region transcription start site region 108955
Tssr108956 11 70455221 to 70455266 45 - TSS region transcription start site region 108956
Tssr108957 11 70455298 to 70455317 19 - TSS region transcription start site region 108957
Tssr108958 11 70455330 to 70455357 27 - TSS region transcription start site region 108958
Tssr102697 11 70455763 to 70455818 55 + TSS region transcription start site region 102697
Tssr102698 11 70455858 to 70455892 34 + TSS region transcription start site region 102698
Tssr108959 11 70455931 to 70455997 66 - TSS region transcription start site region 108959
Tssr102699 11 70456028 to 70456039 11 + TSS region transcription start site region 102699
Tssr102700 11 70458782 to 70458797 15 + TSS region transcription start site region 102700
Tssr108960 11 70458788 to 70458802 14 - TSS region transcription start site region 108960
Tssr108961 11 70458812 to 70458848 36 - TSS region transcription start site region 108961
Tssr102701 11 70458978 to 70458989 11 + TSS region transcription start site region 102701
Cpgi3185 11 70459391 to 70460177 786 CpG island CpG island 3185
Tssr102702 11 70459426 to 70459527 101 + TSS region transcription start site region 102702
Tssr108962 11 70459501 to 70459514 13 - TSS region transcription start site region 108962
Tssr3569 11 70459603 to 70459607 4 + TSS region transcription start site region 3569
Tssr102703 11 70459611 to 70459633 22 + TSS region transcription start site region 102703
Zmynd15 11 70459622 to 70466202 6580 + protein coding gene zinc finger, MYND-type containing 15
Tssr108963 11 70459630 to 70459652 22 - TSS region transcription start site region 108963
Tssr108964 11 70459656 to 70459705 49 - TSS region transcription start site region 108964
Tssr102704 11 70459709 to 70459727 18 + TSS region transcription start site region 102704
Tssr108965 11 70459717 to 70459730 13 - TSS region transcription start site region 108965
Tssr108966 11 70459749 to 70459767 18 - TSS region transcription start site region 108966
Tssr102705 11 70459779 to 70459799 20 + TSS region transcription start site region 102705
Tssr108967 11 70459801 to 70459812 11 - TSS region transcription start site region 108967
Tssr108968 11 70459832 to 70459841 9 - TSS region transcription start site region 108968
Tssr108969 11 70459858 to 70459869 11 - TSS region transcription start site region 108969
Tssr108970 11 70459879 to 70459919 40 - TSS region transcription start site region 108970
Tssr102706 11 70459899 to 70459956 57 + TSS region transcription start site region 102706
Tssr108971 11 70459925 to 70459949 24 - TSS region transcription start site region 108971
Tssr108972 11 70459957 to 70459984 27 - TSS region transcription start site region 108972
Tssr102707 11 70459960 to 70459985 25 + TSS region transcription start site region 102707
Tssr108973 11 70459986 to 70460001 15 - TSS region transcription start site region 108973
Tssr108974 11 70460006 to 70460013 7 - TSS region transcription start site region 108974
Tssr102708 11 70460071 to 70460112 41 + TSS region transcription start site region 102708
Tssr102709 11 70460142 to 70460187 45 + TSS region transcription start site region 102709
Tssr102710 11 70463888 to 70463929 41 + TSS region transcription start site region 102710
Tssr102711 11 70465347 to 70465375 28 + TSS region transcription start site region 102711