Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69847352-69950987

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plscr3 11 69846376 to 69852058 5682 + protein coding gene phospholipid scramblase 3
Tssr102540 11 69847333 to 69847380 47 + TSS region transcription start site region 102540
Tssr102541 11 69847467 to 69847489 22 + TSS region transcription start site region 102541
Tnk1 11 69851005 to 69858730 7725 - protein coding gene tyrosine kinase, non-receptor, 1
Cpgi3154 11 69855429 to 69855749 320 CpG island CpG island 3154
Tssr108861 11 69858687 to 69858713 26 - TSS region transcription start site region 108861
Tssr108862 11 69858723 to 69858737 14 - TSS region transcription start site region 108862
Gm32708 11 69858797 to 69868244 9447 + lncRNA gene predicted gene, 32708
Tmem95 11 69876684 to 69878018 1334 - protein coding gene transmembrane protein 95
Tssr102542 11 69877236 to 69877244 8 + TSS region transcription start site region 102542
Tssr108863 11 69878030 to 69878058 28 - TSS region transcription start site region 108863
Kctd11 11 69878264 to 69880985 2721 - protein coding gene potassium channel tetramerisation domain containing 11
Cpgi3155 11 69880557 to 69881724 1167 CpG island CpG island 3155
Tssr108864 11 69880856 to 69880863 7 - TSS region transcription start site region 108864
Tssr108865 11 69880866 to 69880937 71 - TSS region transcription start site region 108865
Tssr108866 11 69880941 to 69880963 22 - TSS region transcription start site region 108866
Tssr108867 11 69880971 to 69880985 14 - TSS region transcription start site region 108867
Acap1 11 69881567 to 69895539 13972 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
Mir6924 11 69882032 to 69882094 62 - miRNA gene microRNA 6924
Tssr102543 11 69884281 to 69884290 9 + TSS region transcription start site region 102543
Tssr108868 11 69892111 to 69892115 4 - TSS region transcription start site region 108868
Tssr108869 11 69894787 to 69894812 25 - TSS region transcription start site region 108869
Tssr102544 11 69895029 to 69895034 5 + TSS region transcription start site region 102544
Tssr108870 11 69895465 to 69895474 9 - TSS region transcription start site region 108870
Tssr108871 11 69895498 to 69895520 22 - TSS region transcription start site region 108871
Tssr108872 11 69895523 to 69895560 37 - TSS region transcription start site region 108872
2810408A11Rik 11 69897352 to 69900987 3635 - protein coding gene RIKEN cDNA 2810408A11 gene
Cpgi3156 11 69900607 to 69902464 1857 CpG island CpG island 3156
Tssr108873 11 69900880 to 69900881 1 - TSS region transcription start site region 108873
Tssr108874 11 69900896 to 69900929 33 - TSS region transcription start site region 108874
Tssr108875 11 69900930 to 69900941 11 - TSS region transcription start site region 108875
Tssr108876 11 69900949 to 69901001 52 - TSS region transcription start site region 108876
Tssr108877 11 69901034 to 69901041 7 - TSS region transcription start site region 108877
Tssr102545 11 69901128 to 69901143 15 + TSS region transcription start site region 102545
Tssr102546 11 69901704 to 69901758 54 + TSS region transcription start site region 102546
Neurl4 11 69901816 to 69913824 12008 + protein coding gene neuralized E3 ubiquitin protein ligase 4
Tssr102547 11 69901848 to 69901894 46 + TSS region transcription start site region 102547
Tssr102548 11 69909006 to 69909017 11 + TSS region transcription start site region 102548
Tssr102549 11 69909020 to 69909032 12 + TSS region transcription start site region 102549
Tssr102550 11 69911329 to 69911348 19 + TSS region transcription start site region 102550
Tssr102551 11 69911350 to 69911360 10 + TSS region transcription start site region 102551
Cpgi3157 11 69913340 to 69914709 1369 CpG island CpG island 3157
Gps2 11 69913888 to 69916591 2703 + protein coding gene G protein pathway suppressor 2
Tssr102552 11 69914008 to 69914078 70 + TSS region transcription start site region 102552
Tssr102553 11 69914152 to 69914163 11 + TSS region transcription start site region 102553
Tssr102554 11 69914179 to 69914193 14 + TSS region transcription start site region 102554
Tssr102555 11 69914236 to 69914266 30 + TSS region transcription start site region 102555
Tssr102556 11 69914286 to 69914297 11 + TSS region transcription start site region 102556
Tssr102557 11 69916040 to 69916055 15 + TSS region transcription start site region 102557
Eif5a 11 69916714 to 69921958 5244 - protein coding gene eukaryotic translation initiation factor 5A
Tssr108878 11 69916975 to 69917002 27 - TSS region transcription start site region 108878
Tssr108879 11 69917242 to 69917272 30 - TSS region transcription start site region 108879
Tssr102558 11 69917300 to 69917314 14 + TSS region transcription start site region 102558
Tssr108880 11 69917699 to 69917734 35 - TSS region transcription start site region 108880
Tssr102559 11 69919910 to 69919915 5 + TSS region transcription start site region 102559
Cpgi3158 11 69920153 to 69922039 1886 CpG island CpG island 3158
Tssr108881 11 69920483 to 69920519 36 - TSS region transcription start site region 108881
Tssr108882 11 69920520 to 69920535 15 - TSS region transcription start site region 108882
Tssr108883 11 69920537 to 69920580 43 - TSS region transcription start site region 108883
Tssr108884 11 69920581 to 69920591 10 - TSS region transcription start site region 108884
Tssr108885 11 69920849 to 69920875 26 - TSS region transcription start site region 108885
Tssr108886 11 69920892 to 69920966 74 - TSS region transcription start site region 108886
Tssr108887 11 69921057 to 69921077 20 - TSS region transcription start site region 108887
Tssr3563 11 69921209 to 69921218 9 - TSS region transcription start site region 3563
Tssr108888 11 69921227 to 69921243 16 - TSS region transcription start site region 108888
Tssr108889 11 69921244 to 69921323 79 - TSS region transcription start site region 108889
Tssr108890 11 69921329 to 69921347 18 - TSS region transcription start site region 108890
Tssr3564 11 69921400 to 69921403 3 - TSS region transcription start site region 3564
Tssr102560 11 69921732 to 69921762 30 + TSS region transcription start site region 102560
Tssr102561 11 69921779 to 69921839 60 + TSS region transcription start site region 102561
Tssr102562 11 69921996 to 69922006 10 + TSS region transcription start site region 102562
Cpgi3159 11 69934272 to 69934514 242 CpG island CpG island 3159
Cpgi3160 11 69935209 to 69936466 1257 CpG island CpG island 3160
Tssr102563 11 69935695 to 69935703 8 + TSS region transcription start site region 102563
Tssr108891 11 69935756 to 69935765 9 - TSS region transcription start site region 108891
Tssr102564 11 69935797 to 69935817 20 + TSS region transcription start site region 102564
Tssr102565 11 69935818 to 69935843 25 + TSS region transcription start site region 102565
Ybx2 11 69935834 to 69941604 5770 + protein coding gene Y box protein 2
Tssr102566 11 69935845 to 69935854 9 + TSS region transcription start site region 102566
Tssr102567 11 69935865 to 69935883 18 + TSS region transcription start site region 102567
Tssr102568 11 69935894 to 69935931 37 + TSS region transcription start site region 102568
Tssr102569 11 69935935 to 69935965 30 + TSS region transcription start site region 102569
Tssr102570 11 69935989 to 69936000 11 + TSS region transcription start site region 102570
Tssr108892 11 69936148 to 69936161 13 - TSS region transcription start site region 108892
Tssr108893 11 69936172 to 69936211 39 - TSS region transcription start site region 108893
Tssr108894 11 69936233 to 69936279 46 - TSS region transcription start site region 108894
Tssr108895 11 69939318 to 69939325 7 - TSS region transcription start site region 108895
Tssr102571 11 69939902 to 69939913 11 + TSS region transcription start site region 102571
Tssr102572 11 69940107 to 69940116 9 + TSS region transcription start site region 102572
Tssr102573 11 69940383 to 69940390 7 + TSS region transcription start site region 102573
Tssr102574 11 69940586 to 69940599 13 + TSS region transcription start site region 102574
Tssr108896 11 69940634 to 69940646 12 - TSS region transcription start site region 108896
Tssr102575 11 69940719 to 69940735 16 + TSS region transcription start site region 102575
Tssr102576 11 69941063 to 69941078 15 + TSS region transcription start site region 102576
Tssr3565 11 69941089 to 69941099 10 + TSS region transcription start site region 3565
Tssr102577 11 69941240 to 69941271 31 + TSS region transcription start site region 102577
Tssr102578 11 69941324 to 69941329 5 + TSS region transcription start site region 102578
Slc2a4 11 69942539 to 69948188 5649 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 4
Tssr108897 11 69947409 to 69947432 23 - TSS region transcription start site region 108897
Cpgi3161 11 69947933 to 69949012 1079 CpG island CpG island 3161
Tssr108898 11 69948153 to 69948206 53 - TSS region transcription start site region 108898
Gm12310 11 69950798 to 69951289 491 + pseudogene predicted gene 12310