MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:66251635-66801703

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12296	11	66168035 to 66301237	133202	+	lncRNA gene	predicted gene 12296
Gm45917	11	66168522 to 66426709	258187	+	lncRNA gene	predicted gene, 45917
Shisa6	11	66211725 to 66525964	314239	-	protein coding gene	shisa family member 6
Gm45945	11	66248645 to 66279197	30552	+	lncRNA gene	predicted gene, 45945
Tssr102132	11	66319753 to 66319756	3	+	TSS region	transcription start site region 102132
D11Mit193	11	66337519 to 66337653	134		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 193
Tssr108497	11	66339589 to 66339593	4	-	TSS region	transcription start site region 108497
Tssr102133	11	66380391 to 66380394	3	+	TSS region	transcription start site region 102133
Cpgi3060	11	66525114 to 66527255	2141		CpG island	CpG island 3060
Tssr108498	11	66526571 to 66526582	11	-	TSS region	transcription start site region 108498
Tssr108499	11	66526617 to 66526628	11	-	TSS region	transcription start site region 108499
Tssr108500	11	66526635 to 66526703	68	-	TSS region	transcription start site region 108500
Tssr108501	11	66526710 to 66526734	24	-	TSS region	transcription start site region 108501
Tssr108502	11	66526986 to 66527018	32	-	TSS region	transcription start site region 108502
Gm40028	11	66547785 to 66556312	8527	+	lncRNA gene	predicted gene, 40028
D11Mit113	11	66550163 to 66550307	144		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 113
Tssr3521	11	66563535 to 66563540	5	+	TSS region	transcription start site region 3521
Gm12297	11	66563607 to 66564585	978	+	pseudogene	predicted gene 12297