Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:65173549-65313562

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ckdbp2 11 54190115 to 65213015 11022900 QTL chronic kidney disease blood pressure locus 2
Tssr108464 11 65174384 to 65174391 7 - TSS region transcription start site region 108464
Myocd 11 65176561 to 65269989 93428 - protein coding gene myocardin
Tssr108465 11 65178089 to 65178096 7 - TSS region transcription start site region 108465
Cpgi3054 11 65187419 to 65187665 246 CpG island CpG island 3054
D11Mit177 11 65212885 to 65213015 130 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 177
Tssr108466 11 65221796 to 65221821 25 - TSS region transcription start site region 108466
Tssr108467 11 65243549 to 65243562 13 - TSS region transcription start site region 108467
Tssr108468 11 65243570 to 65243603 33 - TSS region transcription start site region 108468
Tssr108469 11 65243636 to 65243651 15 - TSS region transcription start site region 108469
Tssr108470 11 65243656 to 65243668 12 - TSS region transcription start site region 108470
Tssr108471 11 65261708 to 65261725 17 - TSS region transcription start site region 108471
Tssr108472 11 65261740 to 65261747 7 - TSS region transcription start site region 108472
Tssr108473 11 65261809 to 65261818 9 - TSS region transcription start site region 108473
Tssr108474 11 65261885 to 65261893 8 - TSS region transcription start site region 108474
Tssr108475 11 65269078 to 65269089 11 - TSS region transcription start site region 108475
Cpgi3055 11 65269840 to 65270489 649 CpG island CpG island 3055
Tssr108476 11 65269863 to 65269879 16 - TSS region transcription start site region 108476
Tssr108477 11 65269947 to 65269954 7 - TSS region transcription start site region 108477
Tssr108478 11 65269984 to 65270002 18 - TSS region transcription start site region 108478
Gm30586 11 65270010 to 65287592 17582 + lncRNA gene predicted gene, 30586
Tssr102126 11 65270144 to 65270161 17 + TSS region transcription start site region 102126
Tssr102127 11 65272235 to 65272244 9 + TSS region transcription start site region 102127
Gm12295 11 65277654 to 65287833 10179 - lincRNA gene predicted gene 12295