Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:62024563-62237303

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Specc1 11 61956763 to 62223013 266250 + protein coding gene sperm antigen with calponin homology and coiled-coil domains 1
Tssr101994 11 62028654 to 62028657 3 + TSS region transcription start site region 101994
Gm39988 11 62038464 to 62054431 15967 - lncRNA gene predicted gene, 39988
Tssr101995 11 62057234 to 62057238 4 + TSS region transcription start site region 101995
Cpgi3019 11 62076644 to 62077716 1072 CpG island CpG island 3019
Tssr101996 11 62077018 to 62077101 83 + TSS region transcription start site region 101996
Tssr101997 11 62107537 to 62107542 5 + TSS region transcription start site region 101997
Gm39985 11 62129563 to 62132303 2740 - lncRNA gene predicted gene, 39985
Tssr101998 11 62131084 to 62131088 4 + TSS region transcription start site region 101998
D11Mit261 11 62151201 to 62151308 107 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 261
Tssr108389 11 62185064 to 62185067 3 - TSS region transcription start site region 108389
Tssr108390 11 62205165 to 62205176 11 - TSS region transcription start site region 108390
D11Mit318 11 62206383 to 62206483 100 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 318