MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:59399953-59500035

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snap47	11	59407141 to 59450034	42893	-	protein coding gene	synaptosomal-associated protein, 47
Tssr108217	11	59413088 to 59413095	7	-	TSS region	transcription start site region 108217
Tssr108218	11	59421620 to 59421636	16	-	TSS region	transcription start site region 108218
Tssr108219	11	59430117 to 59430121	4	-	TSS region	transcription start site region 108219
Cpgi2962	11	59449459 to 59450721	1262		CpG island	CpG island 2962
Tssr108220	11	59449941 to 59449950	9	-	TSS region	transcription start site region 108220
Tssr108221	11	59449953 to 59450035	82	-	TSS region	transcription start site region 108221
Tssr101796	11	59450040 to 59450095	55	+	TSS region	transcription start site region 101796
Jmjd4	11	59450045 to 59458567	8522	+	protein coding gene	jumonji domain containing 4
Tssr101797	11	59450130 to 59450140	10	+	TSS region	transcription start site region 101797
Zfp867	11	59461197 to 59472474	11277	-	protein coding gene	zinc finger protein 867
Cpgi2963	11	59471880 to 59472599	719		CpG island	CpG island 2963
Tssr108222	11	59472432 to 59472460	28	-	TSS region	transcription start site region 108222
Tssr108223	11	59472464 to 59472488	24	-	TSS region	transcription start site region 108223
Gm12263	11	59474287 to 59475765	1478	-	pseudogene	predicted gene 12263
Gm12262	11	59481973 to 59482277	304	+	pseudogene	predicted gene 12262
Zkscan17	11	59485520 to 59506640	21120	-	protein coding gene	zinc finger with KRAB and SCAN domains 17
Tssr108224	11	59490074 to 59490075	1	-	TSS region	transcription start site region 108224