Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:58833703-58953710

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Mit155b 11 58838468 to 58838578 110 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 155b
Olfr311 11 58841116 to 58842042 926 + protein coding gene olfactory receptor 311
Cpgi2935 11 58847029 to 58847508 479 CpG island CpG island 2935
Tssr101753 11 58847153 to 58847226 73 + TSS region transcription start site region 101753
Gm12258 11 58847158 to 58861956 14798 + protein coding gene predicted gene 12258
Gm12259 11 58865965 to 58867154 1189 + lincRNA gene predicted gene 12259
Cpgi2936 11 58867076 to 58867581 505 CpG island CpG island 2936
Tssr101754 11 58867204 to 58867229 25 + TSS region transcription start site region 101754
2810021J22Rik 11 58867216 to 58883288 16072 + protein coding gene RIKEN cDNA 2810021J22 gene
Tssr101755 11 58867230 to 58867275 45 + TSS region transcription start site region 101755
Tssr101756 11 58884042 to 58884074 32 + TSS region transcription start site region 101756
Tssr101757 11 58884089 to 58884098 9 + TSS region transcription start site region 101757
Tssr101758 11 58884101 to 58884113 12 + TSS region transcription start site region 101758
Zfp39 11 58888153 to 58904225 16072 - protein coding gene zinc finger protein 39
Tssr108174 11 58889298 to 58889301 3 - TSS region transcription start site region 108174
Gm12256 11 58889710 to 58891548 1838 + antisense lncRNA gene predicted gene 12256
Tssr108175 11 58889713 to 58889726 13 - TSS region transcription start site region 108175
Tssr101759 11 58893703 to 58893710 7 + TSS region transcription start site region 101759
Cpgi2937 11 58903766 to 58904439 673 CpG island CpG island 2937
Tssr108176 11 58904145 to 58904157 12 - TSS region transcription start site region 108176
Tssr108177 11 58904158 to 58904168 10 - TSS region transcription start site region 108177
Tssr108178 11 58904173 to 58904217 44 - TSS region transcription start site region 108178
Tssr108179 11 58904219 to 58904236 17 - TSS region transcription start site region 108179
Gm12257 11 58904402 to 58906170 1768 + antisense lncRNA gene predicted gene 12257
Cpgi2938 11 58914323 to 58914496 173 CpG island CpG island 2938
Btnl10 11 58917877 to 58926965 9088 + protein coding gene butyrophilin-like 10
Tssr101760 11 58917889 to 58917915 26 + TSS region transcription start site region 101760
Tssr101761 11 58917946 to 58917962 16 + TSS region transcription start site region 101761
Tssr101762 11 58917973 to 58918002 29 + TSS region transcription start site region 101762
Tssr101763 11 58918004 to 58918015 11 + TSS region transcription start site region 101763
Tssr101764 11 58926188 to 58926200 12 + TSS region transcription start site region 101764
Tssr108180 11 58928480 to 58928491 11 - TSS region transcription start site region 108180
Rnf187 11 58932288 to 58938906 6618 - protein coding gene ring finger protein 187
Tssr108181 11 58933256 to 58933295 39 - TSS region transcription start site region 108181
Cpgi2939 11 58938072 to 58939230 1158 CpG island CpG island 2939
Tssr108182 11 58938851 to 58938923 72 - TSS region transcription start site region 108182
Cpgi2940 11 58948171 to 58949370 1199 CpG island CpG island 2940
Tssr101765 11 58948890 to 58948920 30 + TSS region transcription start site region 101765
Hist3h2ba 11 58948911 to 58949372 461 + protein coding gene histone cluster 3, H2ba