Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:55396643-55511138

Filter by:
39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(11Sparc-Gpx3)91Anjm 11 54902854 to 55420080 517226 cytogenetic marker deletion, Chr 11, Andrew N J McKenzie
Sparc 11 55394159 to 55420080 25921 - protein coding gene secreted acidic cysteine rich glycoprotein
Tssr108076 11 55398574 to 55398679 105 - TSS region transcription start site region 108076
Tssr108077 11 55399218 to 55399238 20 - TSS region transcription start site region 108077
Tssr108078 11 55399258 to 55399269 11 - TSS region transcription start site region 108078
Tssr108079 11 55399310 to 55399336 26 - TSS region transcription start site region 108079
Tssr101618 11 55401945 to 55401956 11 + TSS region transcription start site region 101618
Tssr108080 11 55401974 to 55402003 29 - TSS region transcription start site region 108080
Tssr108081 11 55404508 to 55404533 25 - TSS region transcription start site region 108081
Tssr108082 11 55405211 to 55405283 72 - TSS region transcription start site region 108082
Tssr101619 11 55405238 to 55405265 27 + TSS region transcription start site region 101619
Tssr108083 11 55405297 to 55405312 15 - TSS region transcription start site region 108083
Tssr101620 11 55406546 to 55406558 12 + TSS region transcription start site region 101620
Tssr108084 11 55406578 to 55406608 30 - TSS region transcription start site region 108084
Tssr108085 11 55409960 to 55410008 48 - TSS region transcription start site region 108085
Tssr108086 11 55410009 to 55410022 13 - TSS region transcription start site region 108086
Tssr108087 11 55410207 to 55410212 5 - TSS region transcription start site region 108087
Tssr101621 11 55417224 to 55417232 8 + TSS region transcription start site region 101621
Tssr108088 11 55419843 to 55419855 12 - TSS region transcription start site region 108088
Tssr108089 11 55419859 to 55419874 15 - TSS region transcription start site region 108089
Tssr108090 11 55419904 to 55419915 11 - TSS region transcription start site region 108090
D11Mit312 11 55422875 to 55422995 120 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 312
Atox1 11 55446643 to 55461138 14495 - protein coding gene antioxidant 1 copper chaperone
Cpgi2900 11 55460758 to 55461439 681 CpG island CpG island 2900
Tssr108091 11 55461131 to 55461156 25 - TSS region transcription start site region 108091
Tssr108092 11 55461166 to 55461177 11 - TSS region transcription start site region 108092
Tssr108093 11 55461179 to 55461190 11 - TSS region transcription start site region 108093
Gm12235 11 55463840 to 55464009 169 - pseudogene predicted gene 12235
Cpgi2901 11 55468841 to 55470446 1605 CpG island CpG island 2901
Tssr108094 11 55469145 to 55469185 40 - TSS region transcription start site region 108094
Tssr101622 11 55469648 to 55469659 11 + TSS region transcription start site region 101622
Tssr101623 11 55469677 to 55469716 39 + TSS region transcription start site region 101623
Tssr101624 11 55469724 to 55469742 18 + TSS region transcription start site region 101624
G3bp1 11 55469752 to 55500888 31136 + protein coding gene GTPase activating protein (SH3 domain) binding protein 1
Tssr101625 11 55470165 to 55470181 16 + TSS region transcription start site region 101625
Gm22884 11 55482694 to 55482833 139 + snoRNA gene predicted gene, 22884
Gm12238 11 55482706 to 55482829 123 + sense intronic lncRNA gene predicted gene 12238
Tssr101626 11 55496567 to 55496574 7 + TSS region transcription start site region 101626
Mir7652 11 55501226 to 55501281 55 + miRNA gene microRNA 7652