Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:54949932-55098866

Filter by:
34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnip1 11 54910785 to 54962917 52132 - protein coding gene TNFAIP3 interacting protein 1
Tssr108027 11 54952422 to 54952428 6 - TSS region transcription start site region 108027
Cpgi2894 11 54955592 to 54956391 799 CpG island CpG island 2894
Tssr101579 11 54955817 to 54955839 22 + TSS region transcription start site region 101579
Tssr108028 11 54956033 to 54956040 7 - TSS region transcription start site region 108028
Tssr108029 11 54956049 to 54956115 66 - TSS region transcription start site region 108029
Tssr101580 11 54956195 to 54956202 7 + TSS region transcription start site region 101580
Tssr101581 11 54956224 to 54956240 16 + TSS region transcription start site region 101581
Tssr101582 11 54958660 to 54958664 4 + TSS region transcription start site region 101582
Tssr101583 11 54960533 to 54960552 19 + TSS region transcription start site region 101583
Tssr101584 11 54960561 to 54960573 12 + TSS region transcription start site region 101584
Tssr101585 11 54961702 to 54961709 7 + TSS region transcription start site region 101585
Tssr101586 11 54961737 to 54961756 19 + TSS region transcription start site region 101586
Tssr108030 11 54962873 to 54962874 1 - TSS region transcription start site region 108030
Tssr108031 11 54962903 to 54962953 50 - TSS region transcription start site region 108031
Tssr108032 11 54971952 to 54971954 2 - TSS region transcription start site region 108032
Tssr108033 11 54973771 to 54973801 30 - TSS region transcription start site region 108033
Anxa6 11 54979108 to 55033445 54337 - protein coding gene annexin A6
Tssr108034 11 54982744 to 54982749 5 - TSS region transcription start site region 108034
Tssr108035 11 54985164 to 54985178 14 - TSS region transcription start site region 108035
Gm19911 11 55019932 to 55028866 8934 + lncRNA gene predicted gene, 19911
Tssr108036 11 55021815 to 55021863 48 - TSS region transcription start site region 108036
Cpgi2895 11 55033113 to 55033608 495 CpG island CpG island 2895
Tssr108037 11 55033398 to 55033461 63 - TSS region transcription start site region 108037
Ccdc69 11 55049731 to 55078131 28400 - protein coding gene coiled-coil domain containing 69
Cpgi2896 11 55077509 to 55078381 872 CpG island CpG island 2896
Tssr108038 11 55078075 to 55078119 44 - TSS region transcription start site region 108038
Tssr108039 11 55078120 to 55078145 25 - TSS region transcription start site region 108039
Cpgi2897 11 55097458 to 55098609 1151 CpG island CpG island 2897
Tssr101587 11 55097968 to 55097979 11 + TSS region transcription start site region 101587
Tssr101588 11 55098042 to 55098102 60 + TSS region transcription start site region 101588
Tssr101589 11 55098104 to 55098129 25 + TSS region transcription start site region 101589
Gm2a 11 55098115 to 55113029 14914 + protein coding gene GM2 ganglioside activator protein
Tssr101590 11 55098132 to 55098150 18 + TSS region transcription start site region 101590