Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:54909108-55103445

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpx3 11 54902854 to 54910382 7528 + protein coding gene glutathione peroxidase 3
Tssr101566 11 54909102 to 54909113 11 + TSS region transcription start site region 101566
Tssr101567 11 54909463 to 54909476 13 + TSS region transcription start site region 101567
Tssr101568 11 54909539 to 54909550 11 + TSS region transcription start site region 101568
Tssr101569 11 54909622 to 54909633 11 + TSS region transcription start site region 101569
Tssr3502 11 54909641 to 54909644 3 - TSS region transcription start site region 3502
Tssr101570 11 54909644 to 54909684 40 + TSS region transcription start site region 101570
Tssr108011 11 54909657 to 54909687 30 - TSS region transcription start site region 108011
Tssr108012 11 54909691 to 54909768 77 - TSS region transcription start site region 108012
Tssr101571 11 54909698 to 54909760 62 + TSS region transcription start site region 101571
Tssr108013 11 54909785 to 54909788 3 - TSS region transcription start site region 108013
Tssr108014 11 54909792 to 54909803 11 - TSS region transcription start site region 108014
Tssr101572 11 54909793 to 54909804 11 + TSS region transcription start site region 101572
Tssr101573 11 54909830 to 54909831 1 + TSS region transcription start site region 101573
Tssr101574 11 54909844 to 54909856 12 + TSS region transcription start site region 101574
Tssr108015 11 54909875 to 54909884 9 - TSS region transcription start site region 108015
Tssr101575 11 54909892 to 54909903 11 + TSS region transcription start site region 101575
Tssr101576 11 54909906 to 54909924 18 + TSS region transcription start site region 101576
Tssr108016 11 54909927 to 54909946 19 - TSS region transcription start site region 108016
Tssr101577 11 54909935 to 54909946 11 + TSS region transcription start site region 101577
Tssr108017 11 54909978 to 54909987 9 - TSS region transcription start site region 108017
Tssr108018 11 54909993 to 54910008 15 - TSS region transcription start site region 108018
Tssr101578 11 54910018 to 54910031 13 + TSS region transcription start site region 101578
Tssr108019 11 54910029 to 54910077 48 - TSS region transcription start site region 108019
Tssr108020 11 54910085 to 54910096 11 - TSS region transcription start site region 108020
Tssr108021 11 54910105 to 54910113 8 - TSS region transcription start site region 108021
Tssr3503 11 54910115 to 54910116 1 + TSS region transcription start site region 3503
Tssr108022 11 54910116 to 54910156 40 - TSS region transcription start site region 108022
Tssr108023 11 54910369 to 54910380 11 - TSS region transcription start site region 108023
Tnip1 11 54910785 to 54962917 52132 - protein coding gene TNFAIP3 interacting protein 1
Tssr108024 11 54916951 to 54916966 15 - TSS region transcription start site region 108024
Tssr108025 11 54917888 to 54917900 12 - TSS region transcription start site region 108025
Tssr108026 11 54918651 to 54918683 32 - TSS region transcription start site region 108026
Gm12230 11 54947435 to 54947888 453 + pseudogene predicted gene 12230
Tssr108027 11 54952422 to 54952428 6 - TSS region transcription start site region 108027
Cpgi2894 11 54955592 to 54956391 799 CpG island CpG island 2894
Tssr101579 11 54955817 to 54955839 22 + TSS region transcription start site region 101579
Tssr108028 11 54956033 to 54956040 7 - TSS region transcription start site region 108028
Tssr108029 11 54956049 to 54956115 66 - TSS region transcription start site region 108029
Tssr101580 11 54956195 to 54956202 7 + TSS region transcription start site region 101580
Tssr101581 11 54956224 to 54956240 16 + TSS region transcription start site region 101581
Tssr101582 11 54958660 to 54958664 4 + TSS region transcription start site region 101582
Tssr101583 11 54960533 to 54960552 19 + TSS region transcription start site region 101583
Tssr101584 11 54960561 to 54960573 12 + TSS region transcription start site region 101584
Tssr101585 11 54961702 to 54961709 7 + TSS region transcription start site region 101585
Tssr101586 11 54961737 to 54961756 19 + TSS region transcription start site region 101586
Tssr108030 11 54962873 to 54962874 1 - TSS region transcription start site region 108030
Tssr108031 11 54962903 to 54962953 50 - TSS region transcription start site region 108031
Tssr108032 11 54971952 to 54971954 2 - TSS region transcription start site region 108032
Tssr108033 11 54973771 to 54973801 30 - TSS region transcription start site region 108033
Anxa6 11 54979108 to 55033445 54337 - protein coding gene annexin A6
Tssr108034 11 54982744 to 54982749 5 - TSS region transcription start site region 108034
Tssr108035 11 54985164 to 54985178 14 - TSS region transcription start site region 108035
Gm19911 11 55019932 to 55028866 8934 + lncRNA gene predicted gene, 19911
Tssr108036 11 55021815 to 55021863 48 - TSS region transcription start site region 108036
Cpgi2895 11 55033113 to 55033608 495 CpG island CpG island 2895
Tssr108037 11 55033398 to 55033461 63 - TSS region transcription start site region 108037
Ccdc69 11 55049731 to 55078131 28400 - protein coding gene coiled-coil domain containing 69
Cpgi2896 11 55077509 to 55078381 872 CpG island CpG island 2896
Tssr108038 11 55078075 to 55078119 44 - TSS region transcription start site region 108038
Tssr108039 11 55078120 to 55078145 25 - TSS region transcription start site region 108039
Cpgi2897 11 55097458 to 55098609 1151 CpG island CpG island 2897
Tssr101587 11 55097968 to 55097979 11 + TSS region transcription start site region 101587
Tssr101588 11 55098042 to 55098102 60 + TSS region transcription start site region 101588
Tssr101589 11 55098104 to 55098129 25 + TSS region transcription start site region 101589
Gm2a 11 55098115 to 55113029 14914 + protein coding gene GM2 ganglioside activator protein
Tssr101590 11 55098132 to 55098150 18 + TSS region transcription start site region 101590