Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:54815767-54905778

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lyrm7os 11 54819919 to 54824967 5048 + antisense lncRNA gene LYR motif containing 7, opposite strand
Lyrm7 11 54826866 to 54860916 34050 - protein coding gene LYR motif containing 7
Gm25426 11 54829711 to 54829880 169 + snRNA gene predicted gene, 25426
Tssr108002 11 54845538 to 54845544 6 - TSS region transcription start site region 108002
Gm18818 11 54845786 to 54846433 647 + pseudogene predicted gene, 18818
Tssr101538 11 54848359 to 54848364 5 + TSS region transcription start site region 101538
Tssr108003 11 54850489 to 54850524 35 - TSS region transcription start site region 108003
Tssr108004 11 54850525 to 54850536 11 - TSS region transcription start site region 108004
Gm31490 11 54859095 to 54862859 3764 + lncRNA gene predicted gene, 31490
Cpgi2891 11 54860487 to 54860967 480 CpG island CpG island 2891
Tssr108005 11 54860564 to 54860603 39 - TSS region transcription start site region 108005
Tssr3501 11 54860767 to 54860778 11 + TSS region transcription start site region 3501
Tssr101539 11 54860790 to 54860836 46 + TSS region transcription start site region 101539
Tssr101540 11 54861015 to 54861026 11 + TSS region transcription start site region 101540
Cpgi2892 11 54866166 to 54867211 1045 CpG island CpG island 2892
Tssr101541 11 54866374 to 54866392 18 + TSS region transcription start site region 101541
Tssr101542 11 54866413 to 54866459 46 + TSS region transcription start site region 101542
Hint1 11 54866438 to 54870496 4058 + protein coding gene histidine triad nucleotide binding protein 1
Tssr101543 11 54891507 to 54891516 9 + TSS region transcription start site region 101543
Tssr101544 11 54902118 to 54902126 8 + TSS region transcription start site region 101544
Tssr101545 11 54902743 to 54902769 26 + TSS region transcription start site region 101545
Tssr101546 11 54902847 to 54902858 11 + TSS region transcription start site region 101546
Del(11Sparc-Gpx3)91Anjm 11 54902854 to 55420080 517226 cytogenetic marker deletion, Chr 11, Andrew N J McKenzie
Gpx3 11 54902854 to 54910382 7528 + protein coding gene glutathione peroxidase 3
Cpgi2893 11 54902864 to 54903175 311 CpG island CpG island 2893
Tssr101547 11 54902888 to 54902894 6 + TSS region transcription start site region 101547
Tssr101548 11 54902899 to 54902905 6 + TSS region transcription start site region 101548
Tssr101549 11 54902917 to 54902932 15 + TSS region transcription start site region 101549
Tssr101550 11 54904001 to 54904006 5 + TSS region transcription start site region 101550