MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:54718907-54838911

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdc42se2	11	54717456 to 54787675	70219	-	protein coding gene	CDC42 small effector 2
Tssr107994	11	54726798 to 54726844	46	-	TSS region	transcription start site region 107994
Tssr107995	11	54727496 to 54727521	25	-	TSS region	transcription start site region 107995
Gm12227	11	54728677 to 54734323	5646	+	antisense lncRNA gene	predicted gene 12227
Gm12229	11	54746357 to 54746824	467	-	pseudogene	predicted gene 12229
Tssr107996	11	54764154 to 54764174	20	-	TSS region	transcription start site region 107996
Tssr107997	11	54764181 to 54764207	26	-	TSS region	transcription start site region 107997
D11Dcr10	11	54777830 to 54777925	95		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 10
Tssr107998	11	54778907 to 54778911	4	-	TSS region	transcription start site region 107998
Tssr107999	11	54780071 to 54780076	5	-	TSS region	transcription start site region 107999
Cpgi2889	11	54786841 to 54788085	1244		CpG island	CpG island 2889
Tssr108000	11	54787597 to 54787711	114	-	TSS region	transcription start site region 108000
Tssr108001	11	54787717 to 54787720	3	-	TSS region	transcription start site region 108001
2010313P22Rik	11	54802910 to 54814774	11864		unclassified gene	RIKEN cDNA 2010313P22 gene
Cpgi2890	11	54806944 to 54807355	411		CpG island	CpG island 2890
Lyrm7os	11	54819919 to 54824967	5048	+	antisense lncRNA gene	LYR motif containing 7, opposite strand
Lyrm7	11	54826866 to 54860916	34050	-	protein coding gene	LYR motif containing 7
Gm25426	11	54829711 to 54829880	169	+	snRNA gene	predicted gene, 25426