MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:54512872-54532895

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fnip1	11	54438199 to 54518235	80036	+	protein coding gene	folliculin interacting protein 1
Tssr101506	11	54516156 to 54516167	11	+	TSS region	transcription start site region 101506
Tssr101507	11	54516298 to 54516320	22	+	TSS region	transcription start site region 101507
Tssr101508	11	54516715 to 54516728	13	+	TSS region	transcription start site region 101508
Tssr101509	11	54516777 to 54516789	12	+	TSS region	transcription start site region 101509
Tssr101510	11	54516799 to 54516802	3	+	TSS region	transcription start site region 101510
Cpgi2888	11	54522415 to 54523471	1056		CpG island	CpG island 2888
Tssr107991	11	54522647 to 54522660	13	-	TSS region	transcription start site region 107991
Tssr101511	11	54522813 to 54522824	11	+	TSS region	transcription start site region 101511
Rapgef6	11	54522847 to 54699285	176438	+	protein coding gene	Rap guanine nucleotide exchange factor (GEF) 6
Tssr101512	11	54522852 to 54522861	9	+	TSS region	transcription start site region 101512
Tssr101513	11	54522872 to 54522895	23	+	TSS region	transcription start site region 101513
Tssr101514	11	54522898 to 54522909	11	+	TSS region	transcription start site region 101514
Tssr101515	11	54522928 to 54522939	11	+	TSS region	transcription start site region 101515
Tssr101516	11	54522951 to 54522976	25	+	TSS region	transcription start site region 101516
Tssr101517	11	54523313 to 54523360	47	+	TSS region	transcription start site region 101517
Tssr107992	11	54531033 to 54531052	19	-	TSS region	transcription start site region 107992