MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:54388474-54488503

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Meikin	11	54370652 to 54426790	56138	+	protein coding gene	meiotic kinetochore factor
Tssr101493	11	54400952 to 54400976	24	+	TSS region	transcription start site region 101493
Tssr101494	11	54401013 to 54401036	23	+	TSS region	transcription start site region 101494
Gm12226	11	54401092 to 54401967	875	+	pseudogene	predicted pseudogene 12226
Gm12225	11	54404140 to 54404437	297	+	pseudogene	predicted gene 12225
Tssr101495	11	54437768 to 54437773	5	+	TSS region	transcription start site region 101495
Cpgi2887	11	54437815 to 54438834	1019		CpG island	CpG island 2887
Tssr107990	11	54437932 to 54437948	16	-	TSS region	transcription start site region 107990
Tssr101496	11	54438159 to 54438187	28	+	TSS region	transcription start site region 101496
Tssr101497	11	54438188 to 54438220	32	+	TSS region	transcription start site region 101497
Fnip1	11	54438199 to 54518235	80036	+	protein coding gene	folliculin interacting protein 1
Tssr101498	11	54438273 to 54438284	11	+	TSS region	transcription start site region 101498
Tssr101499	11	54438474 to 54438503	29	+	TSS region	transcription start site region 101499
Tssr101500	11	54446964 to 54446973	9	+	TSS region	transcription start site region 101500
Tssr101501	11	54450684 to 54450688	4	+	TSS region	transcription start site region 101501
Tssr101502	11	54455751 to 54455753	2	+	TSS region	transcription start site region 101502
Gm24198	11	54458162 to 54458269	107	+	snRNA gene	predicted gene, 24198
Tssr101503	11	54486421 to 54486424	3	+	TSS region	transcription start site region 101503