MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:54213554-54283561

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(11Irf1-D11Mit23)1Rub	11	53770014 to 54236047	466033		cytogenetic marker	deletion, Chr 11, Edward M Rubin 1
Tssr101477	11	54214761 to 54214766	5	+	TSS region	transcription start site region 101477
Tssr107978	11	54225207 to 54225228	21	-	TSS region	transcription start site region 107978
D11Mit23	11	54235926 to 54236047	121		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 23
Pregq1	11	54235926 to 83842826	29606900		QTL	pregnancy QTL 1
Csf2	11	54247271 to 54249667	2396	-	protein coding gene	colony stimulating factor 2 (granulocyte-macrophage)
Gm12223	11	54247600 to 54254495	6895	+	antisense lncRNA gene	predicted gene 12223
Tssr107979	11	54248481 to 54248492	11	-	TSS region	transcription start site region 107979
Tssr107980	11	54248505 to 54248516	11	-	TSS region	transcription start site region 107980
Tssr107981	11	54248554 to 54248561	7	-	TSS region	transcription start site region 107981
Tssr107982	11	54249001 to 54249012	11	-	TSS region	transcription start site region 107982
Tssr107983	11	54249335 to 54249385	50	-	TSS region	transcription start site region 107983
Tssr107984	11	54249640 to 54249644	4	-	TSS region	transcription start site region 107984
Tssr101478	11	54261755 to 54261763	8	+	TSS region	transcription start site region 101478
Il3	11	54265303 to 54267277	1974	-	protein coding gene	interleukin 3
Tssr107985	11	54267276 to 54267280	4	-	TSS region	transcription start site region 107985
Tssr101479	11	54270828 to 54270830	2	+	TSS region	transcription start site region 101479