MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:54051228-54151275

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pdlim4	11	54054928 to 54069014	14086	-	protein coding gene	PDZ and LIM domain 4
Cpgi2883	11	54068509 to 54069458	949		CpG island	CpG island 2883
Tssr107976	11	54068950 to 54069017	67	-	TSS region	transcription start site region 107976
Tssr107977	11	54069213 to 54069256	43	-	TSS region	transcription start site region 107977
Tssr101466	11	54080597 to 54080601	4	+	TSS region	transcription start site region 101466
Tssr101467	11	54082999 to 54083011	12	+	TSS region	transcription start site region 101467
Cpgi2884	11	54100132 to 54101451	1319		CpG island	CpG island 2884
P4ha2	11	54100924 to 54131668	30744	+	protein coding gene	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
Tssr101468	11	54100969 to 54101025	56	+	TSS region	transcription start site region 101468
Tssr101469	11	54101034 to 54101043	9	+	TSS region	transcription start site region 101469
Tssr101470	11	54101228 to 54101275	47	+	TSS region	transcription start site region 101470
Tssr101471	11	54101581 to 54101590	9	+	TSS region	transcription start site region 101471
Tssr101472	11	54124416 to 54124420	4	+	TSS region	transcription start site region 101472
Tssr101473	11	54124506 to 54124520	14	+	TSS region	transcription start site region 101473
Tssr101474	11	54141797 to 54141804	7	+	TSS region	transcription start site region 101474
Tssr3499	11	54141869 to 54141872	3	+	TSS region	transcription start site region 3499
Tssr101475	11	54141909 to 54141927	18	+	TSS region	transcription start site region 101475