Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:53657269-53757332

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcpm1 11 51561652 to 53725103 2163451 QTL T cell phenotype modifier 1
Rad50 11 53649519 to 53707319 57800 - protein coding gene RAD50 double strand break repair protein
Tssr107946 11 53675981 to 53676010 29 - TSS region transcription start site region 107946
Tssr107947 11 53683298 to 53683337 39 - TSS region transcription start site region 107947
Gm22275 11 53701179 to 53701488 309 + unclassified non-coding RNA gene predicted gene, 22275
Tssr107948 11 53705684 to 53705725 41 - TSS region transcription start site region 107948
Cpgi2874 11 53706702 to 53707645 943 CpG island CpG island 2874
Tssr101428 11 53706783 to 53706814 31 + TSS region transcription start site region 101428
Tssr101429 11 53706817 to 53706829 12 + TSS region transcription start site region 101429
Tssr107949 11 53707269 to 53707332 63 - TSS region transcription start site region 107949
Tssr101430 11 53707413 to 53707433 20 + TSS region transcription start site region 101430
Tssr101431 11 53707752 to 53707762 10 + TSS region transcription start site region 101431
Tssr107950 11 53713081 to 53713086 5 - TSS region transcription start site region 107950
Tssr101432 11 53719444 to 53719460 16 + TSS region transcription start site region 101432
Tssr101433 11 53719960 to 53719974 14 + TSS region transcription start site region 101433
Tssr101434 11 53719990 to 53720004 14 + TSS region transcription start site region 101434
Tssr101435 11 53720010 to 53720027 17 + TSS region transcription start site region 101435
Tssr101436 11 53720081 to 53720088 7 + TSS region transcription start site region 101436
Tssr101437 11 53720790 to 53720795 5 + TSS region transcription start site region 101437
Il5 11 53720794 to 53725103 4309 + protein coding gene interleukin 5
Tssr101438 11 53721903 to 53721929 26 + TSS region transcription start site region 101438
Tria1 11 53722738 to 53723028 290 QTL T cell receptor induced activation 1
D11Nds9 11 53722738 to 53723028 290 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 9
Tssr101439 11 53723732 to 53723747 15 + TSS region transcription start site region 101439
Tssr101440 11 53723768 to 53723790 22 + TSS region transcription start site region 101440
Tssr101441 11 53723938 to 53723955 17 + TSS region transcription start site region 101441
Gm12214 11 53723953 to 53724618 665 - antisense lncRNA gene predicted gene 12214
Tssr101442 11 53723995 to 53724024 29 + TSS region transcription start site region 101442
Tssr101443 11 53724099 to 53724111 12 + TSS region transcription start site region 101443
Tssr107951 11 53724348 to 53724357 9 - TSS region transcription start site region 107951
Tssr107952 11 53724390 to 53724409 19 - TSS region transcription start site region 107952
Tssr101444 11 53724497 to 53724508 11 + TSS region transcription start site region 101444
Tssr107953 11 53724509 to 53724528 19 - TSS region transcription start site region 107953
Tssr101445 11 53724585 to 53724599 14 + TSS region transcription start site region 101445
Tssr101446 11 53724618 to 53724639 21 + TSS region transcription start site region 101446
Tssr101447 11 53724654 to 53724655 1 + TSS region transcription start site region 101447
Gm12213 11 53733579 to 53733931 352 + pseudogene predicted gene 12213
Cpgi2875 11 53735572 to 53736040 468 CpG island CpG island 2875
Tssr101448 11 53752968 to 53752973 5 + TSS region transcription start site region 101448